Pairwise Alignments

Query, 681 a.a., exodeoxyribonuclease V subunit alpha from Dickeya dianthicola ME23

Subject, 608 a.a., exonuclease V (RecBCD complex), alpha chain from Escherichia coli BL21

 Score =  424 bits (1090), Expect = e-123
 Identities = 285/665 (42%), Positives = 368/665 (55%), Gaps = 87/665 (13%)

Query: 22  LRELDRALVRFLHQECPDAPPLLLLGAALVSYQLGRGHVCLDLAATLADSGFSLALPPEG 81
           LR LD   V+F      D  P + L AAL+S+  G GHVCL L+                
Sbjct: 16  LRPLD---VQFALTVAGDEHPAVTLAAALLSHDAGEGHVCLPLS---------------- 56

Query: 82  DRSENRKIARP--AAVLAGV-TLSAWQAALQQPQLVSSGEGSTPLVLVGARLYLRRYWRY 138
            R EN + + P  A  ++ +  L  W+  L   Q VS G+  TP++L G RLYL R W  
Sbjct: 57  -RLENNEASHPLLATCVSEIGELQNWEECLLASQAVSRGDEPTPMILCGDRLYLNRMWCN 115

Query: 139 EQDVRHAITQQLKQNHVLRAAIAPAALRQRLDALFPGDAAGAANWQKLACALAAGSAFSI 198
           E+ V     +    NH +   +  A L Q LD LFP   +   NWQK+A A+A     S+
Sbjct: 116 ERTVARFFNEV---NHAIE--VDEALLAQTLDKLFP--VSDEINWQKVAAAVALTRRISV 168

Query: 199 ITGGPGTGKTTTVVKLLALLQSLALEQHGKPLRIRLAAPTGKAAARLNESIAGAIAGLTL 258
           I+GGPGTGKTTTV KLLA L  +A    G+  RIRLAAPTGKAAARL ES+  A+  L L
Sbjct: 169 ISGGPGTGKTTTVAKLLAALIQMA---DGERCRIRLAAPTGKAAARLTESLGKALRQLPL 225

Query: 259 DGLAQGEAIREHINSEVVTLHRLLGSRPDTRHFRHHADNPLMLDVLVVDEASMVDLEMMA 318
                 +  ++ I  +  TLHRLLG++P ++  RHHA NPL LDVLVVDEASM+DL MM+
Sbjct: 226 S-----DEQKKRIPEDASTLHRLLGAQPGSQRLRHHAGNPLHLDVLVVDEASMIDLPMMS 280

Query: 319 ALLAAMPARSRLILLGDKDQLASVEAGALMGELCRRAAQGHYLPQTRDWLRDVAGDAPDD 378
            L+ A+P  +R+I LGD+DQLASVEAGA++G++C  A  G    + R   R      P  
Sbjct: 281 RLIDALPDHARVIFLGDRDQLASVEAGAVLGDICAYANAGFTAERARQLSRLTGTHVP-- 338

Query: 379 ALLDPHGSALDQSIAMLRHSYRFGADSGIGQLAEAVNDGDAAALAAVWQHGYADL-ARLT 437
           A      ++L  S+ +L+ SYRFG+DSGIGQLA A+N GD  A+  V+Q  + D+  RL 
Sbjct: 339 AGTGTEAASLRDSLCLLQKSYRFGSDSGIGQLAAAINRGDKTAVKTVFQQDFTDIEKRLL 398

Query: 438 LTANDNRALREWVIDGAAGRFASQPHAAAPVGYGDYLRRMVA-TQPDLTAPQSEFDHWAA 496
            +  D  A+ E                 A  GYG YL  + A  +PDL            
Sbjct: 399 QSGEDYIAMLE----------------EALAGYGRYLDLLQARAEPDL------------ 430

Query: 497 QILDAFGQFQLLCALRNGPWGVDSMNERIAHLLYRDGLL--AAWQGWYPGRPVMVTRNDY 554
            I+ AF ++QLLCALR GP+GV  +NERI   + +   +       WY GRPVM+ RND 
Sbjct: 431 -IIQAFNEYQLLCALREGPFGVAGLNERIEQFMQQKRKIHRHPHSRWYEGRPVMIARNDS 489

Query: 555 SQRLMNGDIGITLPVPLLQPDGSRAWVTRVAFPAGDGSSGIRWVLPGRLSAVETVFAMTV 614
           +  L NGDIGI L          R   TRV F   DG+  I+ V P RL   ET +AMTV
Sbjct: 490 ALGLFNGDIGIAL---------DRGQGTRVWFAMPDGN--IKSVQPSRLPEHETTWAMTV 538

Query: 615 HKSQGSEFAHTALLLPDCLSPVLTRELVYTGITRAKHAFSLGCVGEHSTVLAEAVGRRVL 674
           HKSQGSEF H AL+LP   +PV+TRELVYT +TRA+   SL        +L+ A+  R  
Sbjct: 539 HKSQGSEFDHAALILPSQRTPVVTRELVYTAVTRARRRLSLYA---DERILSAAIATRTE 595

Query: 675 RVSGL 679
           R SGL
Sbjct: 596 RRSGL 600