Pairwise Alignments

Query, 575 a.a., type I secretion system permease/ATPase from Dickeya dianthicola ME23

Subject, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

 Score =  221 bits (563), Expect = 8e-62
 Identities = 168/546 (30%), Positives = 271/546 (49%), Gaps = 16/546 (2%)

Query: 8   DRSLFG--VLRQFRRSFWSVGIFSAVINVLMLAPSVYMLQVYDRVLASGNGITLLMLTLL 65
           DR  F   VLR  R  +  V I S V NVL LA  ++ +QVYDRV+ + +  TL +L   
Sbjct: 161 DRHWFARIVLRDLR-PYGQVMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGG 219

Query: 66  MAGLCAFMGALEWVRSLLVVRLGTRIDLALNQDVFNAAFARNLEAGDGRAGL---ALTDL 122
           +     F  ++  +R  +   LG R DL ++  V+  A            G     L +L
Sbjct: 220 VVLALVFDFSMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNSVRPKSTGSFISQLREL 279

Query: 123 TLLRQFITGNALFAFFDVPWFPLFLLVLFLLHPWLGMLALGGTVVLVALAWLNQRLTNQP 182
             +R  IT +      D+P+F LFL V +L+   L  + L   + +V    L QR   + 
Sbjct: 280 ESIRDLITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVALLAMVLPGLLAQRRLARL 339

Query: 183 LAEANQQSQQATHLADAQLRNADVIEAMGMLGNLRRRWLARHYRFISLQNLASERAAAVG 242
              + ++S     +    ++  D I+A+       R+W    Y           R    G
Sbjct: 340 ANASMRESALRNAMLVESIQGLDEIKALQAEARFERQW--NQYNAACAHTNLRLRTLTNG 397

Query: 243 GASKYSRI--ALQSLMLGLGALLAIDGKITPGMMIAGSILVGRVLSPIDQLIGVWKQWSS 300
             +    +  A+ ++++ +GA + I G +T G ++A S+L  R+++P+ QL  V  +W  
Sbjct: 398 LVTWTQNVQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQ 457

Query: 301 ARIAWQRLTRLIAA---YPPRPAAMALPAPEGHLSVEQLSLRPAQGNARLQNI-HFSLQA 356
           A++A Q L +L+ +   +P   A + LPA  G   + Q + R ++    + NI    +Q 
Sbjct: 458 AKVALQGLDKLMQSPVDHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQP 517

Query: 357 GETLVILGASGSGKSSLARLLVGAQSPTQGKVRLDGADLNQVDKSTFGPTIGYLPQDVQL 416
           GE + +LG +G+GKS+L + L GA    QG++ LDG  +  +D +     +G LPQ  +L
Sbjct: 518 GERIAVLGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARL 577

Query: 417 FKGTLAENIAR-FGDADPKKVVAAARLAGVHELILSLPTGYDTELGEGGSGLSGGQRQRI 475
           F GTL EN+    G A  +++VAA    G  + +  LP G D  + EGG GLSGGQRQ +
Sbjct: 578 FHGTLRENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLILEGGLGLSGGQRQAL 637

Query: 476 GLARAMYGDPCLLILDEPNASLDSEGDQALMQAIVALQKRGATVVLITHRPALTTLAQKI 535
            L+R +   P +L+LDEP ASLD   ++ L+  +     +G T+V+ THR ++     +I
Sbjct: 638 VLSRLLVRQPQVLLLDEPTASLDDMTERKLLDNLERF-CQGRTLVIATHRLSVLQRVDRI 696

Query: 536 LILHEG 541
           L+L  G
Sbjct: 697 LVLDAG 702