Pairwise Alignments

Query, 467 a.a., TolC family outer membrane protein from Dickeya dianthicola ME23

Subject, 452 a.a., putative Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  214 bits (545), Expect = 5e-60
 Identities = 149/448 (33%), Positives = 232/448 (51%), Gaps = 23/448 (5%)

Query: 1   MRRKAVLLMVVGVLEVLSLSGGSAQAVGLLDAWELALRNDAQLQAAGFERDAGQEEVAIG 60
           M+R  +++ ++GV          A A+ L  AW+L        +AA  E+ AG E  AIG
Sbjct: 11  MKRPCLMVCLLGVAV-------QASAMDLKQAWDLLQYQGPIYRAAVHEKQAGGENRAIG 63

Query: 61  RAGLLPSLQYNYGVNYSHSKVTQQDRALNNTTKRDYDNYVSTLTLRQPLLDYAAWARYQQ 120
            AGLLP  Q N    ++    +Q+    +N    DYD+  + + LRQPL +    A Y+Q
Sbjct: 64  EAGLLP--QINASAYFNQVNGSQRQNGQDNDL--DYDSKGANVRLRQPLFNKQKMAEYRQ 119

Query: 121 GITRKLMADQRFRDRSQDLMVRLYQAWSEALLAQEKLLLLDAQRRAYQEQLALNRRLLAA 180
           G  R   +   F  +SQD  VRL  A+ + LLA E + L  A+  A++EQLA  +R +  
Sbjct: 120 GQQRADYSVAVFDAKSQDAAVRLADAYFDVLLASETITLAKAKLSAFEEQLASAKRRMEL 179

Query: 181 GEGTQTDLRETEARYTVTEAQRIEQEDTLDAAMTDLENMMGLPLQIQDLSPLALDTLPDN 240
           G GT TD+ E+ AR  + EA  I+ +D L  A   LE  +G        +P AL TL   
Sbjct: 180 GAGTITDVDESVARRDLAEADLIDAQDNLVNARRKLEEYIGE-------TPQALTTLQAG 232

Query: 241 VTENR----SLSQWRELAVRHNAKLAVQRENVDYSRYEIERNRAGHLPTLDLVASTRNSL 296
            +       +L +W   A   +  +  +R +   +  E+ R R+GH PTLD VA      
Sbjct: 233 FSTPPLMPGNLQEWLVKAQADSPLIHARRHSYALAEEEVNRARSGHYPTLDFVAGYTAGS 292

Query: 297 SESEYNYNQKYDTQTVGLQVRVPLYSGGAVSASMRQATAEYQQSQAELDNQTRQTFAELR 356
           S+S    NQ+    ++GL++ +PLYSGG+ SA  RQA+A   ++  ELD   ++  +   
Sbjct: 293 SQSISELNQRNHYSSIGLELNIPLYSGGSTSALSRQASANSSKALDELDATRQEVISNTT 352

Query: 357 RQFNLCANGAAKIRAWQMSVTAAEEAIRATRQSV-AGGERINLDVLMAEQEWYNARRELT 415
           R++    +GA +I+A + +V + E ++ +TR+    GG   N DVL AE+  Y+AR +L 
Sbjct: 353 REYRGVQSGALRIQALEKAVASNERSLTSTRKGFKEGGTSTNSDVLNAEELLYDARHDLF 412

Query: 416 EVKYRWLQAWLNLRYTGGTLNEQDMMQL 443
           E K  +L + L L  + G+L + D+ Q+
Sbjct: 413 EAKLNYLMSRLRLASSVGSLGDDDIEQI 440