Pairwise Alignments

Query, 467 a.a., TolC family outer membrane protein from Dickeya dianthicola ME23

Subject, 471 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score =  124 bits (310), Expect = 9e-33
 Identities = 105/440 (23%), Positives = 190/440 (43%), Gaps = 13/440 (2%)

Query: 23  SAQAVGLLDAWELALRNDAQLQAAGFERDAGQEEVAIGRAGLLPSLQYNYGVNYSHSKVT 82
           S   + L   +  A   D ++ AA     +  E+       LLP +      N + S++ 
Sbjct: 38  STYVLDLAGLYREARLEDPRVLAAYARARSASEQQRAALGSLLPQVS----ANANSSRIL 93

Query: 83  QQDRALNNTTKRD-YDNYVSTLTLRQPLLDYAAWARYQQGITRKLMADQRFRDRSQDLMV 141
           +++ A     +RD Y+    +L+L Q L +  AW RYQ+  + K        D   +  V
Sbjct: 94  RKNEA-----ERDLYNTETYSLSLTQYLYNKPAWERYQKSKSVKDQKGHEAEDTLAEATV 148

Query: 142 RLYQAWSEALLAQEKLLLLDAQRRAYQEQLALNRRLLAAGEGTQTDLRETEARYTVTEAQ 201
            L + +  AL A ++L L+ A+RRA Q+ L     +        TD  + +AR     AQ
Sbjct: 149 DLAKRYFVALAADDELALVQAERRATQKNLDRVSSMFERQMAKITDKLDMQARVDFLLAQ 208

Query: 202 RIEQEDTLDAAMTDLENMMGLPLQIQDLSPLALDTLPDNVTENRSLSQWRELAVRHNAKL 261
            +E  + +  +   L  ++G P+  + LS +  D      T  R L  W   AV +N  L
Sbjct: 209 EVEARNQVQVSREALAEIVGRPIT-EPLSRVRNDVALQAPT--RPLQNWVTQAVENNPLL 265

Query: 262 AVQRENVDYSRYEIERNRAGHLPTLDLVASTRNSLSESEYNYNQKYDTQTVGLQVRVPLY 321
              +   + +   +   +  H P L L  S + +    +     + D+      V++P+Y
Sbjct: 266 KSYQSGAEAANAAVREGKGEHYPQLSLSLSAQQNDQGYDNTQAPRSDSYVASFGVKIPIY 325

Query: 322 SGGAVSASMRQATAEYQQSQAELDNQTRQTFAELRRQFNLCANGAAKIRAWQMSVTAAEE 381
           SGG+ SA +R    +   ++ +L+   RQ   E    +        KIRA + ++++A+ 
Sbjct: 326 SGGSTSARVRGLYDDQLAAEEQLEGVRRQVVKETTTAYLTAQAAVEKIRANRNALSSAQH 385

Query: 382 AIRATRQSVAGGERINLDVLMAEQEWYNARRELTEVKYRWLQAWLNLRYTGGTLNEQDMM 441
           +  A +++   G    +DVL A Q  + ARR+L + +Y ++     L    G LN++ + 
Sbjct: 386 SSVAAQKAFTFGVVNAVDVLTAVQNEFKARRDLLKTQYDFITNLFLLNRWAGELNQESVD 445

Query: 442 QLAAWFQSADGTNKNRGKTA 461
            +  W      T+   G+ A
Sbjct: 446 NVNVWLSPVPETSLPGGEVA 465