Pairwise Alignments

Query, 467 a.a., TolC family outer membrane protein from Dickeya dianthicola ME23

Subject, 478 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 2e-18
 Identities = 106/421 (25%), Positives = 168/421 (39%), Gaps = 57/421 (13%)

Query: 40  DAQLQAAGFERDAGQ---------EEVAIGRAGLLPSL----QYNYGVNYSHSKVTQQDR 86
           DA LQAA +     +         E + + RAG  P +    +  Y   Y   + +Q   
Sbjct: 72  DAVLQAAQWHPSIAEAIGNLYKQGEGINVARAGYYPQISGGIRTGYDTGYGGDRNSQ--- 128

Query: 87  ALNNTTKR---DYDNYVSTLTLRQPLLDYAAWARYQQGITRKLMADQRFRDRSQDLMVRL 143
           ALN + K+   D+    S +   Q     AA AR Q  I   L+ D   RD +       
Sbjct: 129 ALNLSLKQMLYDFGKVDSAVNAAQ-----AAAARAQANIL--LVVDDLARDTAY------ 175

Query: 144 YQAWSEALLAQEKLLLLDAQRRAYQEQLALNRRLLAAGEGTQTDLRETEARYTVTEAQRI 203
             AW E    ++ + +   Q R   +   + R+    G  T++D+ + E+R     A   
Sbjct: 176 --AWIETRRYEQLMTIARDQIRGVGDIAGMARQRSDMGASTRSDVVQAESRVESARATLE 233

Query: 204 EQEDTLDAAMTDLENMMG--LPLQIQDLSPLALDTLPDNVTENRSLSQWRELAVRHNAKL 261
           E +   +   + L  +MG   P  + + SP  LD       +         +A+   A+ 
Sbjct: 234 EYQSQYERWRSTLAALMGRVTPPALAEGSPAELDQACKRPAQGDDRLPAVLMALAQRAQ- 292

Query: 262 AVQRENVDYSRYEIERNRAGHLPTLDLVASTRNSLSESEYNYNQKYDTQTVG--LQVRVP 319
                     + E+ + +A   PTL L     + L +     N + D    G  L V VP
Sbjct: 293 ---------GQAELAQAKAEAYPTLSLQPQVNHYLDDDYNRDNARLDRTQAGIYLNVEVP 343

Query: 320 LYSGGAVSASMRQA-----TAEYQQSQAELDNQTRQTFAELRRQFNLCANGAAKIRAWQM 374
           +Y GG++SA  R A      A+  +  A L  Q R+  AE + Q +        + A Q+
Sbjct: 344 IYQGGSISARTRAAGHALTAADSAEDAARL--QARRGLAEAKAQTSGLGRRLTSLEARQV 401

Query: 375 SVTAAEEAIRATRQSVAGGERINLDVLMAEQEWYNARRELTEVKYRWLQAWLNLRYTGGT 434
           S+  A   +   RQ +  G R  LD+L AEQE Y +R EL   +   L+  ++  Y  G 
Sbjct: 402 SIQEAR--MLYGRQYLDLGTRPLLDLLNAEQEIYQSRFELAGTRSDLLRLDVDCLYNTGA 459

Query: 435 L 435
           L
Sbjct: 460 L 460