Pairwise Alignments

Query, 268 a.a., exodeoxyribonuclease III from Dickeya dianthicola ME23

Subject, 265 a.a., putative Exodeoxyribonuclease III from Pseudomonas putida KT2440

 Score =  153 bits (387), Expect = 3e-42
 Identities = 98/266 (36%), Positives = 139/266 (52%), Gaps = 13/266 (4%)

Query: 1   MKFVSFNINGLRARPNQLAAIIEQHQPDVIGLQETKVHDDMFPLEEVKQFGYHVFYHGQK 60
           +K  +FNING+R+R   L A +E+ QPD+  LQE K  D  FP  E++  GY   +HGQ 
Sbjct: 4   LKIATFNINGIRSRLPALLAWLEREQPDIACLQELKAADQQFPRAELEAAGYGSLHHGQP 63

Query: 61  GHYGVALLTK-AEPLAVRRGFPTDEEDAQRRIIMADLATPLGTLTVVNGYFPQGESRDHP 119
              GVA+L + ++PL VRRG P  EED+Q R + A     L    V   Y P G     P
Sbjct: 64  SWNGVAILVRGSDPLEVRRGLPGLEEDSQSRYLEAAAHGVL----VACLYLPNGNPLPGP 119

Query: 120 VKFPAKTRFYQDLQHYLDQHHQADQPVLIMGDMNISPTDLDIGIGEDNRKRWLRTGKCSF 179
            KF  K  +++ L  +     ++  P L+ GD N+ PTD+DI     N + WL+      
Sbjct: 120 -KFDYKLHWFECLIQHARSLQESGHPTLLAGDFNVVPTDMDI----YNPRSWLKDALLQ- 173

Query: 180 LPEEREWMERLKNWGLVDTFRAANPECQDRFSWFDYRSAGFDDNRGLRIDLIMATAPLAS 239
            PE R   +RL + G +D  R   P+ +  ++++DY    +  N GLRID ++    LA 
Sbjct: 174 -PESRACYQRLLDQGWLDAIRHLYPD-ERVYTFWDYFRNHWARNAGLRIDHLLLNRELAP 231

Query: 240 RCAATGIDYAIRGMEKPSDHAPVWAE 265
                G+D  +R   K SDHAPVW E
Sbjct: 232 YLKRAGVDAWVRNQAKASDHAPVWIE 257