Pairwise Alignments

Query, 470 a.a., murein DD-endopeptidase MepM from Dickeya dianthicola ME23

Subject, 1092 a.a., IncF plasmid conjugative transfer protein TraG from Sphingobium sp. HT1-2

 Score = 85.5 bits (210), Expect = 8e-21
 Identities = 48/127 (37%), Positives = 74/127 (58%), Gaps = 4/127 (3%)

Query: 324  KISSNFNPRRLNPVTGRIAPH-RGVDFSMPVGTPVLAVGDGEVVVAERDSE-AGNFVAVR 381
            +++SN   R ++PVTG+   H RGVD +   G P+ A   G VV  +  +  AGN++ + 
Sbjct: 967  RLTSNMGGR-VDPVTGQPGHHHRGVDIAQRAGAPIPAPASGRVVKNDFQANGAGNYIVLE 1025

Query: 382  HGRQYTTRYMHM-NRLLVKPGQRIKRGDRIGLSGNTGRSTGPHLHYELWVNQQAVNPLTA 440
            HG    ++Y HM +R     G  I++G+ +G  G++G+STGPHLHYELW +   V+P   
Sbjct: 1026 HGDGSQSKYFHMQDRSRFPVGSTIEQGEILGRVGSSGKSTGPHLHYELWKDGAPVDPRRF 1085

Query: 441  KLPRSEG 447
            +L    G
Sbjct: 1086 QLRNGRG 1092



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 39/165 (23%), Positives = 65/165 (39%), Gaps = 21/165 (12%)

Query: 93  TADVTEANSEPLDQPSTTSGIIKDELDDKD-------ADGTHEYVVSTG-DTLSSILTQY 144
           T+ +T++N     QP    G       + D       ADG++ +    G   LS   T+ 
Sbjct: 479 TSGMTQSNKWDT-QPKYNDGFAVGSYTNADGGITYGFADGSNAFDTRQGISNLSFTPTRT 537

Query: 145 -GIDMSDIAALADRNAALRNLKIGQQLTWTLDSDGALQTLTWQASRRETRTYTRNGDAFR 203
            G D     AL++  +  ++L+     +W   +  A   L+    RR + T T  G  F 
Sbjct: 538 SGFDSQMSRALSEGQSHTQSLRNSASQSWNATATTATDLLSAAEHRRGSSTET--GSGFN 595

Query: 204 EEIENVEGDWQNKVLIGRLDGSFASSAQAAGLTSSEVREVIRALQ 248
             +  +     ++ L   L   F       GLT S+ ++V RA Q
Sbjct: 596 NSVARMTD--VSRSLSSGLTSKF-------GLTESDSQQVARATQ 631