Pairwise Alignments

Query, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Dickeya dianthicola ME23

Subject, 352 a.a., ATP-dependent DNA helicase RuvB from Pseudomonas simiae WCS417

 Score =  498 bits (1282), Expect = e-146
 Identities = 250/331 (75%), Positives = 288/331 (87%), Gaps = 1/331 (0%)

Query: 1   MIEADRLISPGAVAD-EELQDRAIRPKLLSEYVGQPVVREQMEIFIEAARRRGDALDHLL 59
           MIEADRLI+     D EE+QDRAIRP  L+EY+GQP VREQME+FI+AAR R ++LDH L
Sbjct: 1   MIEADRLIAATGPRDREEVQDRAIRPLSLAEYIGQPTVREQMELFIQAARGRSESLDHTL 60

Query: 60  IFGPPGLGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAALLTNLEPHDVLFIDEIHRLS 119
           IFGPPGLGKTTLANI+A EMGV++++TSGPVLE+ GDLAALLTNLEPHDVLFIDEIHRLS
Sbjct: 61  IFGPPGLGKTTLANIIAQEMGVSIKSTSGPVLERPGDLAALLTNLEPHDVLFIDEIHRLS 120

Query: 120 PVVEEVLYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQ 179
           P+VEEVLYPAMED+QLDIMIGEGPAARSIKLDLPPFTL+GATTRAG LT+PLRDRFGIVQ
Sbjct: 121 PIVEEVLYPAMEDFQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGMLTNPLRDRFGIVQ 180

Query: 180 RLEFYQVADLQHIVRRSAQCLGLDMTDDGALEVARRSRGTPRIANRLLRRVRDFSEVKSD 239
           RLEFY  ADL  IV RSA  LGL +  +GA E+ARR+RGTPRIANRLLRRVRDF+EV++ 
Sbjct: 181 RLEFYSTADLATIVSRSASILGLPLDPEGAFEIARRARGTPRIANRLLRRVRDFAEVRAK 240

Query: 240 GAISAVVAVQALDMLAVDSEGFDYMDRKLLLAVIDKFMGGPVGLDNLAAAIGEERETIED 299
           G I+  VA  AL++L VD  GFD+ DR+LLL +I+KF GGPVG+D+LAAAI EER TIED
Sbjct: 241 GHITKAVADLALNLLDVDEHGFDHQDRRLLLTMIEKFDGGPVGVDSLAAAISEERHTIED 300

Query: 300 VLEPYLIQQGFLQRTPRGRIATQHAYRHFGL 330
           VLEPYLIQQG++ RTPRGR+ T+HAY HFGL
Sbjct: 301 VLEPYLIQQGYIMRTPRGRVVTRHAYLHFGL 331