Pairwise Alignments

Query, 204 a.a., Holliday junction branch migration protein RuvA from Dickeya dianthicola ME23

Subject, 190 a.a., Holliday junction ATP-dependent DNA helicase RuvA (EC 3.6.4.12) from Variovorax sp. SCN45

 Score =  175 bits (444), Expect = 4e-49
 Identities = 90/204 (44%), Positives = 132/204 (64%), Gaps = 19/204 (9%)

Query: 1   MIGRLRGIVLEKQPPLVLIEASGVGYEVHMPMTCFYELPDLGQEAVIFTHFVVREDAQLL 60
           MIG+L G + E+ PP V+++ +GVGYEV +PM+ FY LP++G +  + THFVVREDAQ+L
Sbjct: 1   MIGKLTGTLAERNPPQVVVDCNGVGYEVDVPMSTFYNLPNVGAKVSLLTHFVVREDAQIL 60

Query: 61  FGFNNKQERSLFRELIKVNGVGPKLALAILSGMSAQQFVNAVERQEINTLVKLPGVGKKT 120
           +GF   +ER+ FR+LIK+ GVGP+ AL +LSGMS  +   A+  QE+  LVK+PG+GKKT
Sbjct: 61  YGFGTAEERAAFRQLIKITGVGPRTALGLLSGMSVGELAQAITTQELGRLVKIPGIGKKT 120

Query: 121 AERLVVEMKDRFKGLNGDLFNAASDISLPAAANAEPEADPQAEAEAALVALGYKPQEAGR 180
           AERL++E+K +            +DI LP    A   +D QA+   AL+ALGY  +EA  
Sbjct: 121 AERLLLELKGKL----------GADIGLP----AHTASDAQADILQALIALGYSDKEAAL 166

Query: 181 MVSNVARPGADCETLIREALRAAL 204
            +  + +     +  + E ++ AL
Sbjct: 167 ALKALPK-----DATVSEGIKLAL 185