Pairwise Alignments

Query, 490 a.a., amino acid permease from Dickeya dianthicola ME23

Subject, 472 a.a., L-alanine and D-alanine permease (from data) from Pseudomonas simiae WCS417

 Score =  308 bits (789), Expect = 3e-88
 Identities = 169/467 (36%), Positives = 257/467 (55%), Gaps = 21/467 (4%)

Query: 1   MAQHETHSAEQRGTTLRRELKARHLTMIAIGGSIGTGLFVASGATVSQAGPGGAMLSYAL 60
           +  H  H    +G  L+REL  RH+ ++A+G  IG GLF+ S   +  AGP   MLSY +
Sbjct: 3   VGNHLPHGETAQGGPLKRELGERHIRLMALGACIGVGLFLGSAKAIEMAGPA-IMLSYII 61

Query: 61  IGLMVYFLMTSLGELAAFMPVSGSFSTYGARYVEEGFGFALGWNYWYNWAVTIAVDLVAA 120
            GL +  +M +LGE+A   PV+GSFS Y   Y+    GF  GWNYW+ W VT   ++ A 
Sbjct: 62  GGLAILVIMRALGEMAVHNPVAGSFSRYAQDYLGPLAGFLTGWNYWFLWLVTCVAEITAV 121

Query: 121 QLVMGYWFPSAPGWVWSALFLSLMFLLNYISVKGFGEAEYWFSLIKVTTVILFIAIGL-L 179
            + MG WFP  P W+W+   L  M  +N I+VK FGE E+WF+LIK+ T+I  +  G+ +
Sbjct: 122 AVYMGVWFPDTPRWIWALAALISMGSINLIAVKAFGEFEFWFALIKIVTIIAMVIGGVGI 181

Query: 180 MMFGILRGGEHAGWHNWQIGDAPFAGGFSAMIGVAMIVGFSFQGTELIGVAAGESKDPQT 239
           + FG    G   G  N          G   ++    +V F++ G E+IG+ AGE+K+PQ 
Sbjct: 182 IAFGFGNDGVALGISNLWAHGGFMPNGVQGVLMSLQMVMFAYLGVEMIGLTAGEAKNPQK 241

Query: 240 TIPRAVRQVFWRILLFYIFAILIISLLVPYTDPNLLRNDVKDISVSPFTLVFENAGLLSA 299
           TIP A+  VFWRILLFY+ A+ +I  + P+       N++     SPF + FE  G+ +A
Sbjct: 242 TIPSAIGSVFWRILLFYVGALFVILSIYPW-------NEI-GTQGSPFVMTFERLGIKTA 293

Query: 300 AAVMNAVILTAVLSAGNSGMYASTRMLFTLAQEGKAPACFGKLSKGGVPRNALYVTTVVA 359
           A ++N V++TA LS+ N G++++ RML++LAQ G+APA F K S  GVPR AL ++    
Sbjct: 294 AGIINFVVITAALSSCNGGIFSTGRMLYSLAQNGQAPATFAKTSSNGVPRKALLLSIFAL 353

Query: 360 GLCFLSSMFGNQTVYLWLLNTSGMTGFIAWLGIAISHYRFRRGYVMQGRDLSSLPYRSGF 419
            L  L +    + V++W+ + +       WL I ++  +FR+   +   + + L YR   
Sbjct: 354 LLGVLLNYLVPEKVFVWVTSIATFGAIWTWLMILLAQLKFRKS--LSPAEQAGLKYRMWL 411

Query: 420 FPLGPIFAFVLCLVITLGQNYQAFLADKIDWYAVTATYIGIPLFLAI 466
           +P+    A    L++       A+  D        A Y+G P+FL +
Sbjct: 412 YPVSSYLALAFLLLVV---GLMAYFPD-----TRIALYVG-PVFLVL 449