Pairwise Alignments

Query, 601 a.a., DEAD/DEAH box helicase from Dickeya dianthicola ME23

Subject, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  951 bits (2458), Expect = 0.0
 Identities = 453/601 (75%), Positives = 520/601 (86%), Gaps = 15/601 (2%)

Query: 1   MSFTLRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVRE 60
           M FTLRPYQQEAVDATL++FR+H  PAVIVLPTGAGKSLVIAELAR+ARGRVLVLAHV+E
Sbjct: 1   MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE 60

Query: 61  LVEQNHAKYCALGLQADIFAAGLNQHDSEGKVVFGSVQSVARHPDKFDDAFSLLIVDECH 120
           LV QNHAKYCALGL+ADIFAAGL + +S+GKVVFGSVQSVAR+ D F + FSLLIVDECH
Sbjct: 61  LVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECH 120

Query: 121 RISDDENSQYQQIIQQAQQANPQLRLLGLTATPYRLGRGWIYQYHYHGMIRGDDGCLFRD 180
           RI DDE+SQYQQI+    + NP LRLLGLTATP+RLG+GWIYQ+HYHGM+RG+D  LFRD
Sbjct: 121 RIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRD 180

Query: 181 CIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAARSDGLFNNGLFNNGLFNNGRFSDV 240
           CIYELPLRYMI+HG+L PPERLDMPVVQYDFS+L A+S+GLF               S+ 
Sbjct: 181 CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLF---------------SEA 225

Query: 241 ELNRELKRQQRVTPHIVRQITEYAANRRGVMIFAATVEHAREVAGLLPASEAALISGETP 300
           +LNRELK+QQR+TPHI+ QI E+A  R+GVMIFAATVEHA+E+ GLLPA +AALI+G+TP
Sbjct: 226 DLNRELKKQQRITPHIISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTP 285

Query: 301 APQRDALIAAFKQQQLRYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLF 360
            P+RDALI  FK Q+ RYLVNVSVLTTGFDAPHVD+IAILRPTESVSLYQQI+GRGLRL 
Sbjct: 286 GPERDALIDNFKAQRFRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLA 345

Query: 361 PGKSDCLILDYAGNPFDLYTPEVGHSKPHSDSQPVQVFCPQCGFANLFWGKCTDDGSVIE 420
           PGK+DCLILDYAGNP DLY PEVG  K  SD+ PVQVFCP CGFAN FWGK T DG++IE
Sbjct: 346 PGKTDCLILDYAGNPHDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIE 405

Query: 421 HYGRRCQGWQADEQGRRQQCDYRFRFKSCPHCGAENDIAARRCQSCEAVLVDPDDMLKAA 480
           H+GRRCQGW  D+ G R+QCD+RFRFK+CP C AENDIAARRC+ C+A+LVDPDDMLKAA
Sbjct: 406 HFGRRCQGWFEDDDGHREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAA 465

Query: 481 LKLKDALVLRCSGMNLQHGADAKGEWLRITYYDEDGADVSERFRLHTAAQRSAFTHVFLR 540
           L+LKDALVLRCSGM +QHG D KGEWL+ITYYDEDGADVSERFRLHT AQR+AF  +F+R
Sbjct: 466 LRLKDALVLRCSGMTMQHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIR 525

Query: 541 AHQRAPGVPFQWQRADDVVAQQALLRAPDFVVARLQGKFWQVREKIFDYQGRYRRAHELR 600
            H R PGVP +W  A D+VAQQALLR PDFVVAR++G++WQVREK+FDY+GR+RRAHELR
Sbjct: 526 PHTRTPGVPLRWITAADIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELR 585

Query: 601 G 601
           G
Sbjct: 586 G 586