Pairwise Alignments

Query, 601 a.a., DEAD/DEAH box helicase from Dickeya dianthicola ME23

Subject, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 66.6 bits (161), Expect = 6e-15
 Identities = 113/430 (26%), Positives = 173/430 (40%), Gaps = 95/430 (22%)

Query: 5   LRPYQQEAVDATLAYFRQHTAPAVIVLPTGAGKS-LVIAELARLARG----RVLVLAHVR 59
           LR YQ++AV A            ++ + TG GK+   IA + RL +     RVL L   R
Sbjct: 444 LRYYQEDAVRAVEQAIVNGQQHILLAMATGTGKTRTAIALMFRLIQSQRFKRVLFLVDRR 503

Query: 60  ELVEQNHAKYCALGLQADIFAA-----GLNQHDSEG--KVVFGSVQSVARHPDKFDDA-- 110
            L EQ    +    +  D F +     GL     E   K+   +VQS+ +   + D+   
Sbjct: 504 SLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMP 563

Query: 111 ---FSLLIVDECHR--ISDDENSQYQ-QIIQQAQQANPQLRLL--------GLTATPYRL 156
              +  ++VDE HR  I D E ++ + Q   Q    +   R+L         LTATP   
Sbjct: 564 VGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTATP--- 620

Query: 157 GRGWIYQYHYHGMIRGDDGCLFRDCIYELPLRYMIRHGFLVPPERLDMPVVQYDFSQLAA 216
                        +   D  +F + +Y    R  +  G+L+     D P+      Q+  
Sbjct: 621 ------------ALHTVD--IFGEPVYRYTYRTAVIDGYLIDQ---DPPI------QIVT 657

Query: 217 RS--DGLF------------NNGLFNNGLFNNGRFSDVELNRELKRQQRVTPHIVR---- 258
           R+  DG++               L N+ L ++  F   + NR L     V P   R    
Sbjct: 658 RNAQDGVYLSEGEQVERLNPQGELINDTLADDQDFEVADFNRGL-----VIPAFNRAVCG 712

Query: 259 QITEYA--ANRRGVMIFAATVEHAREVAGLL--------PASEAALISGETPAPQRDA-- 306
           ++T+Y     ++  ++F  T  HA  V   L        P  E   I   T    +DA  
Sbjct: 713 ELTKYLDPTGQQKTLVFCVTNAHADMVVDELRSAFKKKYPQLEHDAIIKITGDADKDAKK 772

Query: 307 ---LIAAFKQQQL-RYLVNVSVLTTGFDAPHVDVIAILRPTESVSLYQQIIGRGLRLFP- 361
              +I  F +++L   +V V +LTTG D P +  I  LR  +S  LY+Q+ GR  RL P 
Sbjct: 773 VQSMIVRFNKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLCPS 832

Query: 362 -GKSDCLILD 370
            GK+   I D
Sbjct: 833 VGKTSFKIFD 842