Pairwise Alignments

Query, 248 a.a., glutamine ABC transporter substrate-binding protein GlnH from Dickeya dianthicola ME23

Subject, 261 a.a., lysine / arginine / ornithine ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  119 bits (299), Expect = 5e-32
 Identities = 81/253 (32%), Positives = 132/253 (52%), Gaps = 12/253 (4%)

Query: 1   MKSLFKASLAALALA-FSLSGQAAEKSLIVATDTAFVPFEFKQGDKYV-GFDIDLWDAIA 58
           MK L  A L ALAL+ FSL  QAAEK L +  + A+ PF FKQ D  + GFD D+ +A+ 
Sbjct: 1   MKKL--ALLGALALSVFSLVSQAAEKPLKIGIEAAYPPFAFKQPDGSIAGFDYDIGNALC 58

Query: 59  RQLNLNYTLKPMDFSGIIPALQTRNVDLALAGITITEERKRAIDFSDGYYNSGLLVMVRA 118
            ++    T    +F G+IPAL+ R +D  L+ ++IT++RK+++DF+  YY +   ++++ 
Sbjct: 59  EEMKTKCTWVEQEFDGLIPALKVRKIDAILSSMSITDDRKKSVDFTKRYYLTPARLVMKD 118

Query: 119 DNQDIKGEQDLAGKMVAVKSGTGSVDYAKANIKTRELRQFP--NIDNAYLELGTNRADAV 176
                    +L GK + V+ G+    +AK  +  +     P    +  YL++   R D  
Sbjct: 119 GTTVSDSLDELKGKKIGVQRGSIHDRFAKEVLGAKGATVVPYGTQNEIYLDVAAGRLDGT 178

Query: 177 LHDTPNIL-YFIKTAGNGKFKTVGESIKAQQY-----GIAFPKGNDELRNQVNGALKTLR 230
           + D   +   F+KT     F  VG +    +Y     GIA  KG+    +++N A+  +R
Sbjct: 179 VADATLLEDGFLKTDAGKGFAFVGPAFTDAKYFGDGIGIAVRKGDKANVDRINAAIDAIR 238

Query: 231 DNGTYATLYQKWF 243
            NG Y  +  K+F
Sbjct: 239 ANGKYKEIESKYF 251