Pairwise Alignments

Query, 248 a.a., glutamine ABC transporter substrate-binding protein GlnH from Dickeya dianthicola ME23

Subject, 250 a.a., L-lysine and D-lysine ABC transporter, substrate-binding component (from data) from Pseudomonas putida KT2440

 Score =  119 bits (297), Expect = 8e-32
 Identities = 78/241 (32%), Positives = 125/241 (51%), Gaps = 5/241 (2%)

Query: 8   SLAAL-ALAFSLSGQAAEKSLIVATDTAFVPFEFKQGD-KYVGFDIDLWDAIARQLNLNY 65
           S+A L A A  L+G A+ ++L  AT+ A+ PF +   D K  GFD+D+  A+  Q+ +  
Sbjct: 4   SMALLGACALLLAGAASAETLRFATEGAYPPFNYVDADNKLHGFDVDITHALCEQMKVEC 63

Query: 66  TLKPMDFSGIIPALQTRNVDLALAGITITEERKRAIDFSDGYYNSGLLVMVRADNQDIKG 125
           TL   D+ GIIPAL  R  D  +A +  TEER++ I F+D YY + L V V  D++    
Sbjct: 64  TLVAQDWEGIIPALMARKYDAIVASMIDTEERRKKIAFTDHYYRTPLTVAVAKDSKIDSA 123

Query: 126 EQDLAGKMVAVKSGTGSVDYAK--ANIKTRELRQFPNIDNAYLELGTNRADAVLHDTPNI 183
           + D  G  V  +S +    YA+        +++ +P +D A  +L   R D V+ D   +
Sbjct: 124 QTDFVGYTVGAQSSSTQAIYAEDVYGKAGADVKLYPTMDEANADLAAGRLDGVIADKFPL 183

Query: 184 LYFIKTAGNGKFKTVGESIKAQ-QYGIAFPKGNDELRNQVNGALKTLRDNGTYATLYQKW 242
             ++   G    K +G+    +    IA  K ++ LR ++N AL+ +  NGTY  +  K+
Sbjct: 184 HEWMNKNGGDCCKILGDVADTKADAAIAVRKDDEALRQRLNTALQQIVANGTYQKIASKY 243

Query: 243 F 243
           F
Sbjct: 244 F 244