Pairwise Alignments

Query, 670 a.a., excinuclease ABC subunit B from Dickeya dianthicola ME23

Subject, 671 a.a., excinuclease UvrABC protein B from Pseudomonas putida KT2440

 Score =  940 bits (2430), Expect = 0.0
 Identities = 472/669 (70%), Positives = 569/669 (85%), Gaps = 5/669 (0%)

Query: 5   FKLHSDFKPAGDQPEAIRRLEDGLEDGLAHQTLLGVTGSGKTFTVANVIADLNRPTMVLA 64
           F+L + F+PAGDQPEAIR+L +G+E GL+HQTLLGVTGSGKTF++ANVI  + RPT+VLA
Sbjct: 4   FQLVTRFQPAGDQPEAIRQLVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTLVLA 63

Query: 65  PNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIEQMRL 124
           PNKTLAAQLYGE KAFFP NAVEYFVSYYDYYQPEAYVPSSDTFIEKDAS+N+HIEQMRL
Sbjct: 64  PNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQMRL 123

Query: 125 SATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTQGMLIDQRAILRRLAELQYARN 184
           SATKALLERRD ++V +VS IYGLG P+ YLKM+LH+ +G  +DQRA+LRRLA+LQY RN
Sbjct: 124 SATKALLERRDAIIVTTVSCIYGLGSPETYLKMVLHVDRGDKLDQRALLRRLADLQYTRN 183

Query: 185 DQAFARGTFRVRGEIIDIFPAESEDIALRVELFDEEVERLSLFDPLTGHIVQTVPRYTIY 244
           +  FAR TFRVRG++IDIFPAES+  A+R+ELFD+EVE ++ FDPLTG + + +PR+T Y
Sbjct: 184 EMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVENIAAFDPLTGEVFRKLPRFTFY 243

Query: 245 PKTHYVTPRERILQAMEEIKVELADRRQVLLAGNKLLEEQRLAQRTTFDLEMMNELGYCS 304
           PK+HYVTPRE +L+A+E IK EL +R + L   NKL+E QRL QRT FDLEM+ ELGYC+
Sbjct: 244 PKSHYVTPRETLLEAVEGIKEELKERLEYLHKANKLVEAQRLEQRTRFDLEMILELGYCN 303

Query: 305 GIENYSRFLSGRGPGEPPPTLFDYLPADGLLVIDESHVTIPQLGGMYRGDRARKETLVEY 364
           GIENYSR+LSGR  G PPPTL+DYLP D LLVIDESHV++PQ+G MY+GDR+RKETLVEY
Sbjct: 304 GIENYSRYLSGRPAGAPPPTLYDYLPPDALLVIDESHVSVPQVGAMYKGDRSRKETLVEY 363

Query: 365 GFRLPSALDNRPMKFEEFEALAPQTIYVSATPGNYELEKSGGEVIDQVVRPTGLLDPQLE 424
           GFR+PSALDNRPM+F+E+E ++PQTI+VSATPG YE E + G V++QVVRPTGL+DPQ+E
Sbjct: 364 GFRMPSALDNRPMRFDEWEDVSPQTIFVSATPGPYEAEHA-GRVVEQVVRPTGLVDPQVE 422

Query: 425 VRPVTTQVDDLLSEIRKRAVINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDIDTVE 484
           VRP  TQVDDLLSEIRKR    ERVL TTLTKRMAEDL++YL +H  RVRYLHSDIDTVE
Sbjct: 423 VRPALTQVDDLLSEIRKRVAAGERVLATTLTKRMAEDLSDYLADHDVRVRYLHSDIDTVE 482

Query: 485 RVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 544
           RVEIIRDLRLG FDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR
Sbjct: 483 RVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRAAR 542

Query: 545 NLNGKAILYADRITPSMERAMNETQRRREKQQAYNEQHGIVPQGLNKKIGDLLQIGQSAN 604
           NLNG+AILYAD +T SM+RA++ET+RRREKQ A+NE +GIVP+G+ K I D+++      
Sbjct: 543 NLNGRAILYADNVTGSMQRAIDETERRREKQIAFNEANGIVPKGVVKDITDIMEGATVPG 602

Query: 605 GRGKGRG--KKAAEPAAQYQQ--LSPKALDQKIRELESQMLTHAQNLEFEEAARLRDEIH 660
            R K R    KAAE +A+Y+    +P  + ++I++LE +M+  A++LEFE AA+LRDEI 
Sbjct: 603 ARSKKRKGMAKAAEESARYEAELRTPGEITKRIKQLEEKMMQFARDLEFEAAAQLRDEIA 662

Query: 661 ALREQFIAA 669
            LRE+ I++
Sbjct: 663 QLRERLISS 671