Pairwise Alignments

Query, 293 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  197 bits (502), Expect = 2e-55
 Identities = 108/268 (40%), Positives = 168/268 (62%), Gaps = 6/268 (2%)

Query: 12  DRLALLCCLLLLMVLIFGVFAPYIAPHDPALTSVR------HKYQGASLLYPLGTDNLGR 65
           +R A++  + ++++++  +FAP+IAPH P  T+           QG S  Y LGTD +GR
Sbjct: 30  NRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQGGSTSYLLGTDAIGR 89

Query: 66  CVFSRLVFGVRTTVFYSVAAMMLTVLAGAIVGLIAGYFKGRVDGLLMRVCDAMLSFPGEV 125
            + SRL++G R ++   VA + L+V+ G ++GLIAG+F+G ++  +MR+ D +L+ P  +
Sbjct: 90  DILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIAIMRLMDIVLTLPSLL 149

Query: 126 MIFAIVGIIGPGMQNILLAVVLAKWAWYARMVRGMALRYGSKNYVNYARVIAAPSAYVMR 185
           +   IV I+GPG+ N +LAV +     Y R+ R   +   S++YV  ARV  A +  +M 
Sbjct: 150 LAIVIVAILGPGLVNAMLAVAIVVLPHYVRITRAAVIAEVSRDYVTAARVSGAGTLRLMF 209

Query: 186 RHLLPAAAAELVILASADIGSVILMISALSFLGLGAQPPLPEWGNMLSEAKDVMLTHPTQ 245
           R +LP  AA L++ AS  I + IL  +AL FLGLGAQPP PEWG ML++A++ +L     
Sbjct: 210 REVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSPEWGTMLADAREFVLRAWWV 269

Query: 246 MLPAGIAIAVVVAACHVVGDFLRDALDP 273
           +   G+AI + V A +++GD LRDALDP
Sbjct: 270 VTFPGLAILMAVLAFNLLGDGLRDALDP 297