Pairwise Alignments

Query, 293 a.a., ABC transporter permease subunit from Dickeya dianthicola ME23

Subject, 310 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  194 bits (493), Expect = 2e-54
 Identities = 100/278 (35%), Positives = 166/278 (59%), Gaps = 10/278 (3%)

Query: 2   AWAIGKKITQDRLALLCCLLLLMVLIFGVFAPYIAPHDPALTSVRHKYQGASLLYP---- 57
           A+ I ++ +++RLALL  ++++ +L   +FA  +APH+P    +R+    A LL P    
Sbjct: 32  AYVIWRRFSENRLALLGLVIIIALLFVALFADVLAPHNPVQGDLRN----ARLLPPGTAG 87

Query: 58  --LGTDNLGRCVFSRLVFGVRTTVFYSVAAMMLTVLAGAIVGLIAGYFKGRVDGLLMRVC 115
             LGTD+ GR + SRL+ G R T+F  +   ++    G IVG ++GY  G VD +LMR+ 
Sbjct: 88  YLLGTDDQGRDILSRLIHGSRLTLFVVLLVAIIAAPIGLIVGTVSGYAGGWVDAILMRIT 147

Query: 116 DAMLSFPGEVMIFAIVGIIGPGMQNILLAVVLAKWAWYARMVRGMALRYGSKNYVNYARV 175
           D  L+FP  V+  A+V  +GPG++N +LA+ +  W  YAR+ R   + + + +++   ++
Sbjct: 148 DIFLAFPKLVLALALVAALGPGIENAVLAIAVTSWPPYARIARAETMTFRNSDFIAAVKL 207

Query: 176 IAAPSAYVMRRHLLPAAAAELVILASADIGSVILMISALSFLGLGAQPPLPEWGNMLSEA 235
           + A    ++ +H++P   + L++  + D+  +IL  + L FLGLGAQPPLPEWG M++  
Sbjct: 208 MGASPFRIVLKHVMPLCLSSLIVRVTLDMAGIILTAAGLGFLGLGAQPPLPEWGAMIASG 267

Query: 236 KDVMLTHPTQMLPAGIAIAVVVAACHVVGDFLRDALDP 273
           +  +L         GIAI +V    +++GD LRDALDP
Sbjct: 268 RRFILDQWWVAAMPGIAILIVSLGFNLLGDGLRDALDP 305