Pairwise Alignments

Query, 492 a.a., type VI secretion system contractile sheath large subunit from Dickeya dianthicola ME23

Subject, 502 a.a., T6SS component TssC (ImpC/VipB) from Variovorax sp. SCN45

 Score =  361 bits (927), Expect = e-104
 Identities = 184/462 (39%), Positives = 278/462 (60%), Gaps = 9/462 (1%)

Query: 33  DEGYNVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQIDVILHAQELQEL 92
           D+     +  +  L    L++           V ++I E+D+KLS+QI+ ILH +E Q+L
Sbjct: 37  DQAREAVENAVKTLAVQALENTVTISNDAYRSVQAIITEIDRKLSEQINQILHHEEFQQL 96

Query: 93  ESSWRSLKLLIDRTDFRENIKILLLHATKNELLEDFEFAPEI--TQSGFYKHVYSNGYGQ 150
           E +WR L  L++ T+  E +KI ++ A+K E+    +    I   QS  +K +Y   YGQ
Sbjct: 97  EGAWRGLHYLVNNTETDEQLKIRVMCASKREVARSLKRHKGIGWDQSPLFKKIYEAEYGQ 156

Query: 151 FGGQPVGGVIGDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDSFTDLPSIK 210
           FGG+P G +IGD+    S PD++++  ++ + A AH PFI+  +PT   +DS+ +L + +
Sbjct: 157 FGGEPFGALIGDFHFDHSPPDVEMLGEMAKIAAAAHCPFIAGASPTVMQMDSWQELSNPR 216

Query: 211 DLKSVFEGPAYTKWRSMRESEDARYLGLTAPRFLARLPYDPVENPIKGFHYKEDI-SVNH 269
           DL  +F+   +T WRS+R+SEDARY+GL  PRFLARLPY    NP+  F ++E+  S  H
Sbjct: 217 DLTKIFQNTEHTAWRSLRDSEDARYIGLAMPRFLARLPYGARTNPVDEFEFEEETDSAAH 276

Query: 270 EHYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQSGGAITDLPVHVYEA-MGQLQAKIPTE 328
             Y W N+AY MG  I  SF +Y WC +I G +SGGA+ +LP H +    G +  K PTE
Sbjct: 277 NRYTWANSAYAMGVNINRSFKQYGWCTSIRGVESGGAVENLPTHTFPTDDGGVDMKCPTE 336

Query: 329 VLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFANTKEGKEAETNYKLGTQ 388
           + I+DRRE E+A+ GF+ L  RK+SD AAF  A S+Q P  + +     +A  N  L  +
Sbjct: 337 IAISDRREAELAKNGFMPLVHRKNSDFAAFIGAQSLQLPAEYYDA----DATANANLAAR 392

Query: 389 LPYMFIINRLAHYIKVLQREQIGSWKERQDLERELNNWIKQYVADQENPPA-DVRSRRPL 447
           LPY+F   R AHY+K + R++IGS++ER+D+ER LN+WI  YV       + D ++ +PL
Sbjct: 393 LPYLFACCRFAHYLKCIVRDKIGSFREREDMERWLNDWIMNYVDGSPGTSSQDTKAMKPL 452

Query: 448 RAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGANFELSLVGRL 489
            AA+++V  +E  PG+Y     +RPH++  G    L LV +L
Sbjct: 453 AAAEVQVEAIEDNPGYYAAKFFLRPHYQLEGLTVSLRLVSKL 494