Pairwise Alignments

Query, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  399 bits (1026), Expect = e-115
 Identities = 230/555 (41%), Positives = 330/555 (59%), Gaps = 30/555 (5%)

Query: 4   PVLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLAGPQ 63
           P++ +E L  A  + G    +V+++SF+I   E V +VGESGSGK+  A +IM L   P 
Sbjct: 10  PLVSVEGLTLAVGMGGR--EIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPL 67

Query: 64  VRTTGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLRRHR- 122
           VRT GR LF+G DL       ++ +RG R+GMVFQEPMTSLNP + IG Q+ E L  HR 
Sbjct: 68  VRTAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRR 127

Query: 123 GMDHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHPRLLIVDEP 182
            +  A  R   + +L +V I   +  LD +P  FSGGMRQR+++A  +   P LLI DEP
Sbjct: 128 DLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEP 187

Query: 183 TTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMADTRR 242
           TTALD  +Q  +L L+  L  E   ++L I+HD+ +VA    R +VM HG  +E   T  
Sbjct: 188 TTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDD 247

Query: 243 LFRAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAASAPLADTVTPGEPVLAVRG 302
           +   P+H Y++ L  A+P        RLP R                 V    PV+ VR 
Sbjct: 248 MLEQPRHAYTRELLQAMPH-------RLPAR----------------QVPDEAPVVEVRN 284

Query: 303 LIKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLEPNG 362
           L+  +        +   +  A+  +   ++P E +++VG SG GK+T GR I  LL+P+G
Sbjct: 285 LVVDYAGHRRLFAKTVPK-RALHGIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSG 343

Query: 363 GAVSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEPM-ISHGLASAR 421
           G +   G  +L + A   +  R++ QM+FQDPY SL+PR+T+G  + E + +  G+++A 
Sbjct: 344 GEIMFRGRPILRSDAG-WSDYRLQCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTAD 402

Query: 422 QARQKVAELLEKVGLQADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMT 481
           +AR +V E+LE+VGL    A RY H+ SGGQRQR+ IARA+   P  +IADE VSALD+T
Sbjct: 403 RAR-RVQEVLEEVGLGTGFAPRYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVT 461

Query: 482 VKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQH 541
           V+AQ++ L  +LQ++ G + LFISHD+ VVE+++ RV VM  G IVE G R  VF+ P  
Sbjct: 462 VRAQVLALFAELQKRHGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQ 521

Query: 542 PYTRRLLAAVPVPDP 556
            YTR+LL+A+P  +P
Sbjct: 522 DYTRKLLSAIPALEP 536



 Score =  173 bits (439), Expect = 1e-47
 Identities = 102/282 (36%), Positives = 157/282 (55%), Gaps = 17/282 (6%)

Query: 287 LADTVTPGEPVLAVRGLIKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCG 346
           +   +T G P+++V GL          L    G    V NVSF + PGE + +VGESG G
Sbjct: 1   MTTNITNGTPLVSVEGLT---------LAVGMGGREIVRNVSFDIAPGEMVGIVGESGSG 51

Query: 347 KSTAGRAILRLLEP----NGGAVSLCGENMLAAGASALAGLR-MRAQMIFQDPYDSLNPR 401
           K+ A RAI+ L  P      G +   GE++  A  + L  LR  R  M+FQ+P  SLNP 
Sbjct: 52  KTQAARAIMGLTPPPLVRTAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPS 111

Query: 402 LTVGCAIAEPMISHGL-ASARQARQKVAELLEKVGLQADMA--ERYPHQFSGGQRQRLCI 458
           +T+G  + E +  H    S    R+++ ++L +VG++      + +PH+FSGG RQR+ +
Sbjct: 112 MTIGKQLVEALALHRRDLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMML 171

Query: 459 ARALALNPRVIIADEAVSALDMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRV 518
           A  + L P ++IADE  +ALD  V+  ++ L++ L ++   A L ISHD+ +V R + R+
Sbjct: 172 ASVMLLEPALLIADEPTTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRM 231

Query: 519 AVMYQGEIVEIGPRQAVFNDPQHPYTRRLLAAVPVPDPEKRV 560
            VM  GE++E G    +   P+H YTR LL A+P   P ++V
Sbjct: 232 VVMRHGEVMETGRTDDMLEQPRHAYTRELLQAMPHRLPARQV 273



 Score =  152 bits (384), Expect = 4e-41
 Identities = 102/251 (40%), Positives = 137/251 (54%), Gaps = 9/251 (3%)

Query: 35  RETVALVGESGSGKSVTALSIMRLLAGPQVRTTGRALFDGRDLLALPAREMQHIRGNRIG 94
           RE VA+VG SGSGK+    ++ R +AG    + G  +F GR +L   A    +    +  
Sbjct: 315 REVVAVVGGSGSGKT----TLGRTIAGLLQPSGGEIMFRGRPILRSDAGWSDYRL--QCQ 368

Query: 95  MVFQEPMTSLNPVLKIGTQITEVLRRHRGMDHAGARAEAVRLLEKVRIPAARSRLDEYPL 154
           MVFQ+P  SL+P + IG  + E LR  +GM  A        +LE+V +    +    Y  
Sbjct: 369 MVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFA--PRYAH 426

Query: 155 SFSGGMRQRVVIAIALACHPRLLIVDEPTTALDVTIQAQILALIKTLQDEEGMSILFITH 214
             SGG RQRV IA A+   P  +I DEP +ALDVT++AQ+LAL   LQ   G S LFI+H
Sbjct: 427 ELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFISH 486

Query: 215 DMGVVAEVADRTMVMYHGAGVEMADTRRLFRAPQHPYSKTLFSALPRLGDMADSRLPRRF 274
           D+GVV +VADR +VM  G  VE      +F AP   Y++ L SA+P L   A   +  R+
Sbjct: 487 DLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIPALEPTAGGGVRLRW 546

Query: 275 ALFGQSAAASA 285
             FG  A A A
Sbjct: 547 R-FGAEAPALA 556