Pairwise Alignments

Query, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 623 a.a., Dipeptide transport ATP-binding protein DppD in protein degradation cluster from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  642 bits (1656), Expect = 0.0
 Identities = 344/604 (56%), Positives = 432/604 (71%), Gaps = 12/604 (1%)

Query: 2   NQPVLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLL-- 59
           ++ VL +  LN AF   G+ ++ V+++S  +   ET+A+VGESGSGKSVTAL++MRL+  
Sbjct: 9   SRDVLSVSGLNIAFHHEGQQVDAVRNVSLRLKRGETLAIVGESGSGKSVTALALMRLIEQ 68

Query: 60  AGPQVRTTGRALFDGRDLLALPARE-----MQHIRGNRIGMVFQEPMTSLNPVLKIGTQI 114
           +G  VR  G  L   R+   +   E     M+ +RG  I M+FQEPMTSLNPV  +G QI
Sbjct: 69  SGANVRC-GEMLLRRRNRQVIELSEQSDAQMRRVRGADIAMIFQEPMTSLNPVFTVGEQI 127

Query: 115 TEVLRRHRGMDHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHP 174
            E +R H+G  H  A AEA R+L++VRIP +++ L  YP   SGGMRQRV+IA+AL+C P
Sbjct: 128 AESIRLHQGASHEEALAEAKRMLDQVRIPESQAILSRYPHQLSGGMRQRVMIAMALSCRP 187

Query: 175 RLLIVDEPTTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAG 234
            +LI DEPTTALDVTIQAQIL LIK LQ E  M ++FITHDMGVVA++ADR +VMY G  
Sbjct: 188 AVLIADEPTTALDVTIQAQILQLIKVLQQEMSMGVIFITHDMGVVADIADRVLVMYQGEA 247

Query: 235 VEMADTRRLFRAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAA---SAPLADTV 291
           VE     ++F AP HPY++TL +A+P+LG M    LPRRF L      A   S    DTV
Sbjct: 248 VETGSVEQIFHAPTHPYTQTLLAAVPQLGAMRGHSLPRRFPLISADEPALYESQIEQDTV 307

Query: 292 TPGEPVLAVRGLIKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAG 351
             GEP+L VRGL+ RF ++SG   RVT  VHAVEN+SF L PGETLSLVGESG GKST G
Sbjct: 308 VEGEPILQVRGLVTRFPLRSGLFNRVTREVHAVENISFDLWPGETLSLVGESGSGKSTTG 367

Query: 352 RAILRLLEPNGGAVSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEP 411
           RA+LRL+E   G +   G+ +    A  L  LR   Q IFQDPY SL+PR TVG +I EP
Sbjct: 368 RALLRLVESRQGEIIFNGQRIDTLSAGKLQPLRRDIQCIFQDPYASLDPRQTVGYSIMEP 427

Query: 412 MISHGLASARQARQKVAELLEKVGLQADMAERYPHQFSGGQRQRLCIARALALNPRVIIA 471
           +  HGL     A ++VA LLE+VGL+ + A RYPH+FSGGQRQR+CIARALALNP+VIIA
Sbjct: 428 LRIHGLGQGDAAAKRVAWLLERVGLRPEHAWRYPHEFSGGQRQRICIARALALNPKVIIA 487

Query: 472 DEAVSALDMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGP 531
           DEAVSALD++V+ QI+NLLLDLQ+++G+AYLFISHDMAVVERISHRVAVMY G+IVE+GP
Sbjct: 488 DEAVSALDVSVRGQIINLLLDLQREMGIAYLFISHDMAVVERISHRVAVMYLGQIVEMGP 547

Query: 532 RQAVFNDPQHPYTRRLLAAVPVPDPEK-RVRRSMQADELHSPLHPADYQPPARRYQQVGD 590
           R+AVF +PQHPYTR+L+AAVPV DP + R RR + +D++ S +H    + PA   Q VG 
Sbjct: 548 RRAVFENPQHPYTRKLMAAVPVADPSRHRPRRVLLSDDIPSNIHKRGEETPAVSLQLVGP 607

Query: 591 GHLV 594
           GH V
Sbjct: 608 GHYV 611