Pairwise Alignments

Query, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

Subject, 529 a.a., Putative ABC transporter ATP-binding protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  433 bits (1114), Expect = e-126
 Identities = 261/551 (47%), Positives = 336/551 (60%), Gaps = 26/551 (4%)

Query: 1   MNQPVLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLL- 59
           M  P+L IE L+  FR       VV  +S ++   ET+ALVGESGSGKSVTALSI+RLL 
Sbjct: 1   MTSPLLAIENLSVGFRQQQHVRPVVNAISLQVNAGETLALVGESGSGKSVTALSILRLLP 60

Query: 60  AGPQVRTTGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLR 119
             P V  +G   F G  LL    + ++ +RGN+I M+FQEPM SLNP+  +  Q+ EVL 
Sbjct: 61  TPPAVYLSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS 120

Query: 120 RHRGMDHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHPRLLIV 179
            HRGM    ARAE +  L++V I  A  RL +YP   SGG RQRV+IA+AL   P LLI 
Sbjct: 121 LHRGMSREAARAEMIGCLDRVGIRQASQRLRDYPHQLSGGERQRVMIAMALLTRPELLIA 180

Query: 180 DEPTTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMAD 239
           DEPTTALDV++QAQIL+L++ LQ E  M +LFITH++ +V ++AD   VM HG  VE   
Sbjct: 181 DEPTTALDVSVQAQILSLLRELQRELNMGLLFITHNLSIVKKLADSVAVMQHGKCVENQR 240

Query: 240 TRRLFRAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAASAPLADTVTPGEPVLA 299
              L  AP HPY++ L ++ P  GD     LP      GQ+               P+L 
Sbjct: 241 ADTLLSAPTHPYTQKLLNSEP-TGDPVP--LPA-----GQA---------------PLLE 277

Query: 300 VRGLIKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLE 359
           V  L   F ++ G L+RV      V N+SF+L PGETL LVGESG GKST G A+LRL+ 
Sbjct: 278 VDKLRVAFPIRKGILKRVVDHNVVVNNISFTLHPGETLGLVGESGSGKSTTGLALLRLIR 337

Query: 360 PNGGAVSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEPMISH-GLA 418
             G  V   G+++       L  +R R Q++FQDP  SLNPRL V   I E +  H    
Sbjct: 338 SEGRIV-FDGQSLDTLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTL 396

Query: 419 SARQARQKVAELLEKVGLQADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSAL 478
           S  Q  Q+V  ++ +VGL  +   RYP +FSGGQRQR+ +ARAL L P +II DE  S+L
Sbjct: 397 SGAQREQQVKAVMMEVGLDPETRHRYPAEFSGGQRQRIAVARALILKPSLIILDEPTSSL 456

Query: 479 DMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFND 538
           D TV+AQI+ LL  LQQ+  LAY+FISHD+ VV  + H+V V+ QGE+VE G  + VF  
Sbjct: 457 DKTVQAQILALLKSLQQKHRLAYIFISHDLHVVRALCHQVIVLRQGEVVEQGQCERVFTA 516

Query: 539 PQHPYTRRLLA 549
           PQ  YTR+LLA
Sbjct: 517 PQQAYTRQLLA 527



 Score =  172 bits (437), Expect = 2e-47
 Identities = 110/270 (40%), Positives = 159/270 (58%), Gaps = 17/270 (6%)

Query: 296 PVLAVRGLIKRFEVKSGWLRRVTGRVHAVEN-VSFSLQPGETLSLVGESGCGKSTAGRAI 354
           P+LA+  L   F        R    V  V N +S  +  GETL+LVGESG GKS    +I
Sbjct: 4   PLLAIENLSVGF--------RQQQHVRPVVNAISLQVNAGETLALVGESGSGKSVTALSI 55

Query: 355 LRLLEPN-----GGAVSLCGENMLAAGASALAGLR-MRAQMIFQDPYDSLNPRLTVGCAI 408
           LRLL         G +   GE++L A    L G+R  +  MIFQ+P  SLNP  T+   +
Sbjct: 56  LRLLPTPPAVYLSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQL 115

Query: 409 AEPMISHGLASARQARQKVAELLEKVGL-QADMAER-YPHQFSGGQRQRLCIARALALNP 466
            E +  H   S   AR ++   L++VG+ QA    R YPHQ SGG+RQR+ IA AL   P
Sbjct: 116 YEVLSLHRGMSREAARAEMIGCLDRVGIRQASQRLRDYPHQLSGGERQRVMIAMALLTRP 175

Query: 467 RVIIADEAVSALDMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEI 526
            ++IADE  +ALD++V+AQI++LL +LQ++L +  LFI+H++++V++++  VAVM  G+ 
Sbjct: 176 ELLIADEPTTALDVSVQAQILSLLRELQRELNMGLLFITHNLSIVKKLADSVAVMQHGKC 235

Query: 527 VEIGPRQAVFNDPQHPYTRRLLAAVPVPDP 556
           VE      + + P HPYT++LL + P  DP
Sbjct: 236 VENQRADTLLSAPTHPYTQKLLNSEPTGDP 265