Pairwise Alignments

Query, 512 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 541 a.a., dipeptide ABC transporter - periplasmic binding protein from Pseudomonas putida KT2440

 Score =  139 bits (350), Expect = 3e-37
 Identities = 133/509 (26%), Positives = 220/509 (43%), Gaps = 42/509 (8%)

Query: 5   LFVAGLMTLMPIAQAA-DLTIGLASSTTSMDPQFYVGGAN-SAMARNLFDGLVN-QNEKQ 61
           L  AGL++  P A AA +L      S    DP  Y  G +  A A  +F+ L   +    
Sbjct: 10  LLGAGLLSGAPSAVAASNLVFCSEGSPAGFDPGQYTTGTDFDASAETVFNRLTQFERGGT 69

Query: 62  HITPALAVSWKAIDD-TTWQFRLRPNVKFHD------GADVNARDVVASVKRVALAAKNS 114
            + P LA  W+  DD  T+ F LR  VKFH           NA DV+ +  R+       
Sbjct: 70  AVIPGLATKWEVSDDGKTYTFHLREGVKFHTTDYFKPSRPFNADDVLFTFNRMLDKDNPF 129

Query: 115 PSAYT---PYVAD------ISEIREIDPLTVEIKTKVPAALLLNNL--SRIAILPARLVD 163
             AY    PY  D      I+++ ++D  TV+       A  + NL  S  +I  A   D
Sbjct: 130 RKAYPTEFPYFTDMGMDKNIAKVEKLDEHTVKFTLNEVDAAFIQNLAMSFASIQSAEYAD 189

Query: 164 QPTDVLNGGKDV------IGTGPFKFVSYTPDDKVVLSRNDHYWGGK-AEWDTVTLRVIK 216
           Q   +L  GK        IGTGPF F  Y  D ++    N  YW  +  + D +   +  
Sbjct: 190 Q---LLKNGKAADINQKPIGTGPFVFSKYQKDAQIRFKGNKDYWQPEDVKIDNLIFAITT 246

Query: 217 NSSARIAALLSGDVDMIESVPTADRAAIARQQAFATESVPGNRILYLHPDQDRDVSPFAK 276
           ++S R+  L   +  +      AD   +   +        G  + Y+      +V    K
Sbjct: 247 DASVRMQKLKKNECQVTLFPRPADIEPLKADKNLQMPQQAGFNLGYIA----YNVMDKIK 302

Query: 277 GDDGKNPLRKAEVRQAMSLAINRDALVQRILDGQGLPSSQLVPQGYPGYSANIPAPVYDL 336
           G +  NP+ + +VRQA+ +A+++  +++ +  G G  +   +P     Y  +I    +D 
Sbjct: 303 GSNEANPMAQLKVRQALDMAVDKKKIIESVYQGAGQLAVNAMPPTQWSYDDSIKDAAFDP 362

Query: 337 AQAKQKLTAAGYPNGFTLTFHA---SNDRYPNDAKIAQALGQMFSQAGIKTEVVTMPGNV 393
            +AKQ L  AG   G  +T  A        PN   +A+ L   +++ GIK ++V+     
Sbjct: 363 EKAKQLLKEAGIKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGIKAKIVSYEWGE 422

Query: 394 YFAKAAQREFSLVMGGAAIETGEASGVLGPLLETFGPNAGQGNR-GRYSNAEFDKLLNQA 452
           Y  ++   E   ++ G + + G+    LG L   +G +A  GN   ++    +D L+ QA
Sbjct: 423 YIKRSKGGEQGAMLIGWSGDNGDPDNWLGTL---YGCDAVDGNNFSKWCYKPYDDLIKQA 479

Query: 453 RATLDEPQRDALLQQATELAVKEQGVIPL 481
           +AT D+ +R  L Q+A  +  ++  + P+
Sbjct: 480 KATSDQAKRTELYQKAQHILKEQVPITPI 508