Pairwise Alignments

Query, 365 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

Subject, 319 a.a., aliphatic sulfonate ABC transporter substrate-binding protein SsuA from Escherichia coli ECRC62

 Score = 71.2 bits (173), Expect = 3e-17
 Identities = 74/272 (27%), Positives = 116/272 (42%), Gaps = 22/272 (8%)

Query: 22  LVLLTVAALGNSARAQEDKPAEIRIGLPDQSAGSKPFIGGPLGLAYIRHSLEQVFEPQGI 81
           L L+ + ++   A A E  P  +RIG    S G        + LA     LE+ + PQ  
Sbjct: 7   LALVGLLSVSTIAVAAESSPEALRIGYQKGSIG--------MVLAKSHQLLEKRY-PQS- 56

Query: 82  KVRWSFFKGAGPAVNEALANQQLDVAYLGDLAAIIGRSGGLPTRVLLG---SRGSSSYLA 138
           K+ W  F  AGP + EAL    +D+   GD+  I  ++ G    V +G    +  +  + 
Sbjct: 57  KISWVEFP-AGPQMLEALNVGSIDLGSTGDIPPIFAQAAGADL-VYVGVEPPKPKAEVIL 114

Query: 139 ATPESGIARIEDLRGKRVAVYKGTADQLSFERALNSAGLNERDIRVINLDWTAGKAALAA 198
               S I  + DL+G +VA  KG++      RAL  AGL   DI+   L     +AA   
Sbjct: 115 VAENSPIKTVADLKGHKVAFQKGSSSHNLLLRALRQAGLKFTDIQPTYLTPADARAAFQQ 174

Query: 199 RRID--AVWGGVSLLALRPQGIRIITSSRDLGWANTTQAVVLATQDFIQRYPQVTRQLAA 256
             +D  A+W      AL   G+R++    DL   N T +  LA + + ++     + + A
Sbjct: 175 GNVDAWAIWDPYYSAALLQGGVRVLKDGTDL---NQTGSFYLAARPYAEKNGAFIQGVLA 231

Query: 257 VLVQEARWVSDPAHQADYIKLMADQSQIPAPL 288
              +          Q+  I L A    +PAP+
Sbjct: 232 TFSEADALTRSQREQS--IALPAKTMGLPAPV 261