Pairwise Alignments

Query, 415 a.a., type III PLP-dependent enzyme from Dickeya dianthicola ME23

Subject, 421 a.a., Diaminopimelate decarboxylase (EC 4.1.1.20) from Sphingobium sp. HT1-2

 Score =  114 bits (285), Expect = 5e-30
 Identities = 104/355 (29%), Positives = 154/355 (43%), Gaps = 15/355 (4%)

Query: 23  FVYDLTALRRHVSEVMAALPP--GVELYYAIKANSEKPILDALAPLVHGFEISSGGEIAR 80
           +VY    L RHV      L       + +A+KAN    +L  LA L  G ++ SGGE+ R
Sbjct: 30  YVYSTATLERHVGVFREGLSQLDNPLIAFAVKANPNAAVLATLAKLGLGADVVSGGELQR 89

Query: 81  -VAGCATRKPFVFSGPGKLDSDFDLALAQGVEAIHVESRHEIARLQQRAKRHGVVQPVFI 139
            VA        VFSG GK   +  LAL  G+   ++ES  E   L + A   G   PV  
Sbjct: 90  AVAAGIPADRIVFSGVGKTAEEMKLALELGIFQFNLESEPEAEMLSEVALSMGRKAPVAY 149

Query: 140 RINPELASSLTSKLAMAGTPTPFGMDEADLADAVRDVDNASHLQLKGFHVHAMSHQMVVA 199
           RINP++ +   +K++   +   FG+      D+     +   L ++G  VH  S    +A
Sbjct: 150 RINPDVDAGTHAKISTGKSENKFGIPYDRALDSYAAARDLPGLDVQGVAVHIGSQLTDLA 209

Query: 200 RHQQLLDLYLTRWPQWKALSAHPQPITHLNVGGGIGVPYLTPARFDWPALCDY--LRTRL 257
               L   ++        L A    I   ++GGG+GVPY  P++   P+  DY  + TR+
Sbjct: 210 ---PLEAAFVKVGALIAQLRAAGHDIRTADLGGGLGVPY-DPSQPLPPSPADYGAMVTRV 265

Query: 258 AQQPDAPVIRFEPGRFISAYCGYYAIEVLDKKRSHGKHFLVCRGGTHQFRLPAAQGHDHP 317
            Q  DA ++ FEPGR I    G    +V+  K+     F++     +    P+     H 
Sbjct: 266 TQGWDARLM-FEPGRVIVGNAGVLLSQVIRVKQGAQAPFVIVDAAMNDLMRPSLYDAWHD 324

Query: 318 VIHLPLTAAPTTGEMRDWTVVGQLCTPKDVLSRDQRLTDVNIGDLLVLPLAGAYG 372
           +      A    G      VVG +C   D  +  + +  V  GDLL    AGAYG
Sbjct: 325 I-----RAVAPDGNRIASNVVGPVCETGDTFAMGRDMDVVAAGDLLTFMTAGAYG 374