Pairwise Alignments

Query, 575 a.a., hydrogenase large subunit from Dickeya dianthicola ME23

Subject, 596 a.a., NADH:ubiquinone oxidoreductase, chain C,D (RefSeq) from Escherichia coli BW25113

 Score =  174 bits (440), Expect = 1e-47
 Identities = 157/594 (26%), Positives = 276/594 (46%), Gaps = 73/594 (12%)

Query: 11  ENLGANYVAHVRQQF-PTAILEEERQTANQLTITVKLHQLPEVVEYLYYQHGGWLSV--L 67
           ++L    +  +R +F P A   +  +T   + + +K  QL EV ++L      ++ +  L
Sbjct: 15  DHLDDPVIGELRNRFGPDAFTVQATRTGVPV-VWIKREQLLEVGDFLKKLPKPYVMLFDL 73

Query: 68  FGNDERTLNGH--------FAIYY-VLSMEQGEKCWVVVKALVNPTVPEFPSVTPRVPAA 118
            G DER L  H        F+++Y ++S+++     +++K  +       P+ T   P A
Sbjct: 74  HGMDER-LRTHREGLPAADFSVFYHLISIDRNRD--IMLKVALAENDLHVPTFTKLFPNA 130

Query: 119 VWGEREVRDMYGLIPVGLPDERRLVLPDDWPDDLYPLRKDAMDYRQRPAPTR-------- 170
            W ERE  D++G+   G P+ RR+++P  W    +PLRKD        +P          
Sbjct: 131 NWYERETWDLFGITFDGHPNLRRIMMPQTWKG--HPLRKDYPARATEFSPFELTKAKQDL 188

Query: 171 DDESYSFINEATG--------DTRVVPIGPLHITSDEPGHFRLFVDGEQIIDADYRLFYV 222
           + E+ +F  E  G        D   + +GP H ++       L +DGE+I+D    + Y 
Sbjct: 189 EMEALTFKPEEWGMKRGTENEDFMFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH 248

Query: 223 HRGMEKLAETRMGYNEVTFLSDRVCGICGFTHSVAYTSSIENALGVVVPARAHTIRSILL 282
           HRG EK+ E +  ++ + + +DR+  + G  + + Y  ++E   G+ VP R + IR +L 
Sbjct: 249 HRGAEKMGERQSWHSYIPY-TDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLS 307

Query: 283 EVERLHSHLLNIGLSSHFVGFDTGFMQFFRVREKSMQIAEMLTGARKTYGLNLIGGIRRD 342
           E+ R++SHLL I      VG  T     F  R+K   + E +TG R       IGG+  D
Sbjct: 308 ELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHD 367

Query: 343 ILKEDRLKTIRLIRE----MREEVTQLTDMLLNTANMAQRTQGVGVLNRQVARDYSPVGP 398
           + +       RL+RE    M + +       L    +  R+QGV     + A ++   G 
Sbjct: 368 LPRG----WDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTTGA 423

Query: 399 MIRASGFQRDVRIDHPFAGYLDLPMELHHLDGG--DVYSRVLVRVREVFTSLAMIEFGLD 456
            +RA+G   DVR   P++GY +   E+  + GG  D Y+RV+++V E+  SL ++E  L+
Sbjct: 424 GLRATGIDFDVRKARPYSGYENFDFEIP-VGGGVSDCYTRVMLKVEELRQSLRILEQCLN 482

Query: 457 NMPDGPILNEH------------------------INY---QPHKFALGFTEAPRGEDIH 489
           NMP+GP   +H                        +++    P   +    EA +G + +
Sbjct: 483 NMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPANESFQMIEATKGINSY 542

Query: 490 WSMTGDNQKLFRWRCRAATYANWPVLRFMLRGNTISDAPLIIGSLDPCYSCTDR 543
           +  +  +   +R R R  ++A+   +   +RG+ +SD  + +GS+D   S  DR
Sbjct: 543 YLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVYLGSIDFVMSDVDR 596