Pairwise Alignments

Query, 490 a.a., PTS transporter subunit EIIC from Dickeya dianthicola ME23

Subject, 568 a.a., PTS N-acetyl-D-glucosamine transporter from Pseudomonas simiae WCS417

 Score =  322 bits (824), Expect = 3e-92
 Identities = 182/480 (37%), Positives = 275/480 (57%), Gaps = 32/480 (6%)

Query: 7   LQKVGRALMVPVATLPAAAILMGVGYWIDPIGWGSESALAALLIKSGAAIIEHMAVLFAV 66
           LQ++GRALM+P+A LP A +L+ +G         ++    A++  +G AI  ++A++FA+
Sbjct: 9   LQRLGRALMLPIAILPIAGLLLRLG--------DTDLLNIAVMHDAGQAIFANLALIFAI 60

Query: 67  GVAYGMSKDKDGAAALSGFVGYLVLTTLCSPAAVSMIQHIPLAEVPKAFSKIENQFIGIL 126
           G+A G ++D +G A L+G +GYLV+ +       S+                     GI 
Sbjct: 61  GIAVGFARDNNGTAGLAGAIGYLVMVSTLKVMDTSINM---------------GMLAGIA 105

Query: 127 VGVISAEIYNRYGQIELPKALSFFNGRRLVPILVSLLMIVVAFVLMYVWPVIYNALVSFG 186
            G+++  +YNR+  I+LP+ L+FF GRR VPI+     + +  +   +WP I + + SFG
Sbjct: 106 SGLMAGGLYNRFKDIKLPEYLAFFGGRRFVPIVTGFSAVGLGVIFGLIWPPIQHGINSFG 165

Query: 187 EHIQQMGSAGAGIYAFFNRLLIPVGLHHALNSVFWFDVAGINDIPNFLSGQQAIDAGKAI 246
             + + GS GA ++  FNRLLI  GLHH LN++ WF      D          +    A 
Sbjct: 166 VLLMESGSLGAFVFGVFNRLLIVTGLHHILNNMAWFVFGSFTDPVTGAVVTGDLTRYFAG 225

Query: 247 PGITGRYQAGFFPIMMFGLPGAALAIYHCARPENRSRVAGIMVAAALAAFFTGITEPLEF 306
               G++  G FP+M+FGLP A LA+Y  A PE R  + GI ++ AL +F TG+TEP+EF
Sbjct: 226 DPKGGQFMTGMFPVMLFGLPAACLAMYRNALPERRKVMGGIFLSMALTSFLTGVTEPIEF 285

Query: 307 SFMFVAPVLYVLHAVLTGISVFIAASMHWIAGFGFSAGLVDMVLSTRNPLATHWYMLLLQ 366
           +FMF+AP LY++HAVLTG+S+ +   ++   GF FS G +DMVL      +T+ +++   
Sbjct: 286 AFMFLAPFLYLIHAVLTGLSMAVTNMLNIHLGFTFSGGFIDMVLGWGK--STNGWLVFPV 343

Query: 367 GAVFFVIYYGVFRFTITRFNLMTPGREAAVTQTVSESAPAPAGNSQSMARGYLQAIGGKD 426
           G  + +IYY VF + I  FNL TPGRE   TQ V     A A +    A  Y+QA+GG  
Sbjct: 344 GLAYALIYYSVFNYCIRHFNLKTPGRED--TQVVQ----AEAMSDNQRATAYIQALGGAQ 397

Query: 427 NLTGIDACITRLRLSVKDSNLVDESAARNVGAVGVIRL-NKQSVQIVVGTQAENIAAALR 485
           NL  + AC TRLRL + D N   ++  + +GA+ V+R  N  S+Q+VVG  A++IA  +R
Sbjct: 398 NLLSVGACTTRLRLDMVDRNKAVDAELKALGAMAVVRPGNGGSLQVVVGPMADSIADEIR 457