Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

Subject, 390 a.a., N-succinyl-L,L-diaminopimelate desuccinylase (EC 3.5.1.18) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  407 bits (1046), Expect = e-118
 Identities = 211/380 (55%), Positives = 268/380 (70%), Gaps = 10/380 (2%)

Query: 6   IELAQQLIKRPSLSPDDAGCQALMIERLQAIGFTVEKLDVDDTQ----NFWAWRGQGK-- 59
           + L + LI  PS++P D GCQA++  RL  +GF  E ++         N WA  GQG+  
Sbjct: 5   LRLTEALIACPSVTPRDEGCQAMIGARLARLGFACETIESGPADFRVTNLWARLGQGRRP 64

Query: 60  TLAFAGHTDVVPTGDNNQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAAHP 119
           TL FAGHTDVVPTG    W + PF P+ RDG L+GRG ADMK SLAAMVVA E FVAA+P
Sbjct: 65  TLVFAGHTDVVPTGPLTAWTSDPFVPSHRDGKLFGRGTADMKTSLAAMVVACEEFVAANP 124

Query: 120 NHQGRLAFLITSDEEASAVNGTVKVVETLMARQERLEYCLVGEPSSTDRVGDVVKNGRRG 179
                +AFL+TSDEE  A++GTV V + L  R ERL++C+VGEP+S +R GD++KNGRRG
Sbjct: 125 APAIDVAFLLTSDEEGPALDGTVVVCDALRQRGERLDWCIVGEPTSVERTGDMIKNGRRG 184

Query: 180 SITANLRIHGVQGHVAYPHLADNPVHRAIPALNELVATVWDQGNEFFPPTSMQIANINAG 239
           +++  L + G+QGH+AYPHLA NP+H A PAL EL ATVWD+GN FFPPTS QI+NI+ G
Sbjct: 185 TMSGKLTVKGIQGHIAYPHLAKNPIHLAAPALAELTATVWDEGNAFFPPTSWQISNIHGG 244

Query: 240 TGSNNVIPGELDVQFNFRFSTELTDELIKQQVEALLDRHQL----NYTLEWRLSGHPFLT 295
           TG++NVIPG + + FNFRFSTE T E ++Q+V  LL RH L    ++ L+W L G PFLT
Sbjct: 245 TGASNVIPGTVVIDFNFRFSTESTPEGLQQRVAELLQRHGLQPGADFDLDWTLGGRPFLT 304

Query: 296 GRGELVDAVVNAVEHYSEITPQLLTTGGTSDGRFIARMGSQVVELGPVNATIHKVNECVS 355
             G LVDAV  AV     I   L TTGGTSDGRFIA++  QV+ELGP NATIHK++E V+
Sbjct: 305 QPGTLVDAVRAAVHAEVGIDTTLSTTGGTSDGRFIAQVCPQVIELGPPNATIHKIDEHVA 364

Query: 356 AADLQLLSRMYQRIMEQLIA 375
            AD++ L  +Y+R +E L A
Sbjct: 365 VADIEPLKNIYRRTLEHLDA 384