Pairwise Alignments

Query, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

Subject, 398 a.a., succinyl-diaminopimelate desuccinylase from Agrobacterium fabrum C58

 Score =  285 bits (728), Expect = 2e-81
 Identities = 155/390 (39%), Positives = 226/390 (57%), Gaps = 20/390 (5%)

Query: 4   PVIELAQQLIKRPSLSPDDAGCQALMIERLQAIGFTVEKL-----DVDDTQNFWAWRG-Q 57
           PV  LA  LI+ PS++P + G  +L+   L  +GF VE++        D +N +A  G +
Sbjct: 6   PVANLAA-LIRCPSVTPAEGGALSLLDTLLSPLGFAVERVMATEDGTPDVENLYARLGTE 64

Query: 58  GKTLAFAGHTDVVPTGDNNQWQTPPFEPAIRDGMLYGRGAADMKGSLAAMVVAAERFVAA 117
           G  L FAGHTDVVP GD   W  PPF   I  G +YGRGA DMKG +A  V A  R +  
Sbjct: 65  GPHLMFAGHTDVVPVGDEAAWSHPPFSADIAGGEMYGRGAVDMKGGIACFVAAIARHIGK 124

Query: 118 HPNHQGRLAFLITSDEEASAVNGTVKVVETLMARQERLEYCLVGEPSSTDRVGDVVKNGR 177
           H   QG ++FLIT DEE  ++NGT K++E   A+ E  + C+VGEP++ D++GD++K GR
Sbjct: 125 HGKPQGSVSFLITGDEEGPSINGTSKLLEWAAAKGETWDACVVGEPTNPDQLGDMIKIGR 184

Query: 178 RGSITANLRIHGVQGHVAYPHLADNPVHRAIPALNELVATVWDQGNEFFPPTSMQIANIN 237
           RGS++  + + GVQGH AYPHLADNP+   +   + L+   +D G + F P+++++  ++
Sbjct: 185 RGSLSGRITVQGVQGHAAYPHLADNPIRGLLQLTHALMHPAFDHGTDDFQPSNLEVTTVD 244

Query: 238 AGTGSNNVIPGELDVQFNFRFSTELTDELIKQQV-----------EALLDRHQLNYTLEW 286
            G  + NVIP      FN RF+   T E ++ ++           E   DR  + Y + W
Sbjct: 245 TGNAATNVIPARATAAFNIRFNDSWTAESLRAEIIRRLDAAANEGELRPDRAPVKYEIVW 304

Query: 287 R-LSGHPFLTGRGELVDAVVNAVEHYSEITPQLLTTGGTSDGRFIARMGSQVVELGPVNA 345
                H FLT    L+ ++  A+E  +   P+L TTGGTSD RFI +    VVE G V  
Sbjct: 305 ADRPSHVFLTRNNALISSLSGAIETVTGKEPKLSTTGGTSDARFI-KDYCPVVEFGLVGQ 363

Query: 346 TIHKVNECVSAADLQLLSRMYQRIMEQLIA 375
           T+H V+E V+ ADL+ L+R+Y+  +E+  A
Sbjct: 364 TMHMVDERVAVADLETLTRIYETFIERWFA 393