Pairwise Alignments

Query, 877 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit A from Dickeya dianthicola ME23

Subject, 906 a.a., DNA gyrase subunit A from Agrobacterium fabrum C58

 Score =  809 bits (2090), Expect = 0.0
 Identities = 444/918 (48%), Positives = 603/918 (65%), Gaps = 83/918 (9%)

Query: 17  LKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMSVLGNDWNKPYKKSARVVGDVIGK 76
           ++ SYLDYAMSVIV RALPDVRDGLKPVHRR+LY MS LG DWNK Y K ARV GDV+GK
Sbjct: 1   MQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGMSELGIDWNKKYVKCARVTGDVMGK 60

Query: 77  YHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEVRMSKIAHELLS 136
           +HPHG+SA+YD + RMAQ +SLR  L+DGQGNFGSIDGD  AA RYTE R+ K AH LL 
Sbjct: 61  FHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSIDGDPPAAERYTECRLEKAAHSLLD 120

Query: 137 DLDKETVDFVPNYDGTEQIPDVMPTRIPNLLVNGSSGIAVGMATNIPPHNLSEVINGCLA 196
           DLDKETVDF  NYDGT Q P V+P + PNLLVNG+ GIAVGMATNIPPHNLSEVI+GC+A
Sbjct: 121 DLDKETVDFRDNYDGTLQEPVVVPAKFPNLLVNGAGGIAVGMATNIPPHNLSEVIDGCVA 180

Query: 197 YIDDENISVEGLMTHIPGPDFPTAAIINGKRGIEEAYRTGRGKVYIRARAEVEADAKSGR 256
            I++  I +  +M  IPGPDFPT A+I G+ GI  AY TGRG V +R  A +E   +  R
Sbjct: 181 LIENPAIELPEMMQIIPGPDFPTGALIMGRSGIRSAYETGRGSVIMRGVATIE-PMRGDR 239

Query: 257 ETIIVHEIPYQVNKARLIEKIAELVKEKRIEGISALRDESDKDGMRIVIEIKRDAVGEVV 316
           E II+ E+PYQVNKA +IEK+AELVKEKRIEGIS LRDESD+ G R+VIE+KRDA  EV+
Sbjct: 240 EQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLRDESDRQGYRVVIELKRDANAEVI 299

Query: 317 LNHLYSQTQMQVSFGINMVALHQGQPKVMTLKEILAAFVRHRREVVTRRTIFELRKARER 376
           LN LY  T +Q SFG NMVAL+ G+P+ MTL ++L AFV  R +VV+RRT + LRKAR+R
Sbjct: 300 LNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRAFVSFREDVVSRRTKYLLRKARDR 359

Query: 377 AHILEGLAIALVNIDPIIELIRHASTPADAKAALVAQAWELGSVASMLERAGDDAARPEW 436
           AH+L GLAI++ NID +I +IRHA  PA A+  L+ + W    V S++    D       
Sbjct: 360 AHVLVGLAISVANIDEVIRVIRHAPDPASAREQLMTRRWPAQDVESLIRLIDD------- 412

Query: 437 LEPEFGIHDD-RYHLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLGQIAELLFILRRP 495
             P   I++D  Y+L+E+QA+AIL+LRL +LT L  +++ DE  ++  +I+E L IL   
Sbjct: 413 --PRHRINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKIGAEISEYLDILSSR 470

Query: 496 ERLMEVIREELLAIREQYNDVRRTEITHNSADINIEDLISEENVVVTLSHQGYVKYQPLS 555
            R+ +++++EL++IR+++   RR++I     D++ EDLI+ E++VVT+SH GY+K  PL+
Sbjct: 471 VRIQQIVKDELVSIRDEFGTPRRSQIVEGGPDMDDEDLIAREDMVVTVSHLGYIKRVPLT 530

Query: 556 DYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWLKVYQLPEASRGAR 615
            Y AQRRGGKG+S    ++EDF++RL VANTH  +L FSSRG +Y  KV++LP  +  ++
Sbjct: 531 TYRAQRRGGKGRSGMATRDEDFVNRLFVANTHTPVLFFSSRGIVYKEKVWRLPIGTPQSK 590

Query: 616 GRPIINLLPLEPDERITAILPVREYE---EGMNVFMATASGTVKKTALTEFSRPRSAGII 672
           G+ +IN+LPLEP ERIT I+P+ E E   E ++V  +T  GTV++  L +F +    G I
Sbjct: 591 GKALINMLPLEPGERITTIMPLPEDETAWETLDVMFSTTRGTVRRNKLGDFVQVNRNGKI 650

Query: 673 AVNLN-EGDELIGVDLTDGSNEVMLFSAEGKVVRFSESAVRTM-GRTATGVRGINLQNDD 730
           A+ L+ EGDE++ V+     ++V+L +A G+ +RF    VR   GR + GVRGIN+   D
Sbjct: 651 AMKLDEEGDEILSVETCTDRDDVLLTTALGQCIRFPVDDVRVFAGRNSVGVRGINMAEGD 710

Query: 731 RVVSLIVPR-------------------------GEGDIL----TVTQNG---------- 751
           R++S+ +                            E DI      VT+ G          
Sbjct: 711 RIISMTIVGHVEAEPWERAAYLKRSATERRAAGVDEEDIALVGEEVTEEGELSEERYQEL 770

Query: 752 --------------FGKRTAVTEYPVKSRATKGVISIKVSERN--GKVVGAVQVDTADQI 795
                         FGKR++  ++    R  KG+ +   ++ N  G++V A  V+  DQI
Sbjct: 771 KAREEFVLTVSVKGFGKRSSSYDFRTSGRGGKGIRATDTAKTNEIGELVAAFPVEEGDQI 830

Query: 796 MMITDAGTLVRTRVSEVSIVGRNTQGVTLIRTAEDERVVGLQRVAEPVEDDELDSVVPVD 855
           M+++D G L+R  V+ + I  R T+GVT+  TA+DE+VV ++R+ EP  DDE        
Sbjct: 831 MLVSDGGQLIRVPVNGIRIASRATKGVTIFSTAKDEKVVSVERINEPEGDDE-------- 882

Query: 856 GELPQEDIDEPETDDDTP 873
                E+ ++ E DD+ P
Sbjct: 883 ----AENGNDDEADDNLP 896