Pairwise Alignments

Query, 588 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Dickeya dianthicola ME23

Subject, 688 a.a., Lipid A export ATP-binding/permease protein MsbA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  292 bits (747), Expect = 4e-83
 Identities = 195/594 (32%), Positives = 316/594 (53%), Gaps = 21/594 (3%)

Query: 9   WYFRREWR-RYLGAVILLIVIAILQLLPPRLVGIIVDGV-----TQRQMATTTVLWWIGG 62
           W F R +R   L   +L +      L+PP L   ++D V       + + T  VL  +GG
Sbjct: 100 WRFARPYRWTLLSGFLLTLASTAATLVPPYLTIPLMDRVLIPFQNGQAIDTGLVLALLGG 159

Query: 63  ILLVALLTYLLRYFWRIWLFG-AAYQLAVELREDFYRQLSRQHPAFYLRHRTGDLIARAT 121
           +L  ALL + L +  R WL    + +++ +LR   +  L      ++   RTGDL+AR  
Sbjct: 160 LLGSALLAWSLGWA-RTWLLALVSERISSDLRTTTFDHLLELSLDYFSSKRTGDLMARIG 218

Query: 122 NDVDRV-VFAAGEGVLTLVDSLVMGCAVLVVMCTQLSWQLTLMALAPMPLMAVIIKRYGT 180
           ++ DR+ VF +   +  L D L++G   +++      W L L  L P+P +  +I     
Sbjct: 219 SETDRISVFLSLHALDFLTDVLMIGMTAVILFSIN-PW-LALATLVPLPFIGWMIHLVRD 276

Query: 181 QLHQRFKDAQAAFSSLNDHAQESLTSIRMIKAFGLEDHQSGSFAQVAADAGQKNMRVARV 240
           +L   F+     +  + +   +++  IR++KAF  E  ++  F +        N R+ + 
Sbjct: 277 RLRTGFEKIDRVWGEVTNVLADTIPGIRVVKAFAQEAREARRFRRANEHNLAVNDRINKT 336

Query: 241 DARFDPTIYIAVAFSNLLAVGGGSWMVINGSMTLGSLTSFVMYLGLMIWPMLALAWMFNI 300
            + F PT+ +      L+    G W+V    +T+G LT+F+ Y+G     + +++ + ++
Sbjct: 337 WSLFTPTVTLLTEIGLLVVWAFGIWLVSQSEITVGVLTAFIAYIGRFYGRLDSMSRIVSV 396

Query: 301 VERGSAAYSRIRQLLSEAPVVVDGSQPLPAE--SGTLAAEIAAFHYPGHSARVLNDVRFT 358
            ++ ++   RI  +L     V + +QP+P     G L  E  +F Y   S  V+ ++   
Sbjct: 397 TQKAASGAKRIFDILDHVSNVPEPTQPVPLTRVQGGLQMENVSFRYG--SRTVIRNLSLD 454

Query: 359 LTPGKTLGLCGPTGSGKSTLLALLQRYFDVEQGRITYHQQPLHQIRLDELRSRFAVVGQT 418
           + PG+ +GL G +GSGKSTL+ LL R++DV +G I      + ++ + + R    +V Q 
Sbjct: 455 IRPGEMIGLVGHSGSGKSTLVNLLCRFYDVSEGGIRIDGTDIRRVGVADFRRHIGLVLQE 514

Query: 419 PFLFSDSVANNIALGRPDASQQQIEEAARLANVHDDILRLPQGYQTEVGERGVMLSGGQK 478
           PFLF  ++A NIA GRP A++ +I  AAR A+ H+ ILRLPQGY + VGERG  LSGG++
Sbjct: 515 PFLFFGTIAENIAYGRPGATRTEIVAAARAAHAHEFILRLPQGYDSLVGERGQGLSGGER 574

Query: 479 QRIAIARALLLEAEVLVLDDALSAVDGRTEHQILSNLRQWGQKRTLIISAHRLSALVDAD 538
           QRI+IARALL++  +L+LD+A S+VD  TE +I   L    Q RT I  AHRLS L  AD
Sbjct: 575 QRISIARALLIDPRILILDEATSSVDTETEKEIQKALDNLVQGRTTIAIAHRLSTLRKAD 634

Query: 539 EILVLQQGHVAQRGAHGQLSQQAGWYRDMY-----RYQQLEAALD-DSPHEARA 586
            ++V+ +G V + G H +L  Q G Y  +Y     + Q+  A LD D+P +  A
Sbjct: 635 RLVVMDRGQVVEIGPHDELMAQRGAYWRLYEAQARKEQEAAALLDADTPEDKDA 688