Pairwise Alignments

Query, 588 a.a., SmdA family multidrug ABC transporter permease/ATP-binding protein from Dickeya dianthicola ME23

Subject, 582 a.a., Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  261 bits (668), Expect = 4e-74
 Identities = 160/530 (30%), Positives = 285/530 (53%), Gaps = 10/530 (1%)

Query: 45  GVTQRQMATTTVLWWIGGILLVALLTYLLRYFWRIWLFGAAYQLAVELREDFYRQLSRQH 104
           G T R +     L  IG ++L  + +Y+  Y    W+ G   ++ + +R   +  +    
Sbjct: 57  GKTDRSVLLWMPLVVIGLMILRGITSYISSYCIS-WVSG---KVVMTMRRRLFGHMMGMP 112

Query: 105 PAFYLRHRTGDLIARATNDVDRVVFAAGEGVLTLVDSLVMGCAV--LVVMCTQLSWQLTL 162
            AF+ +  TG L++R T D ++V  ++   ++T+V     G ++  L +M    SWQL++
Sbjct: 113 VAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVRE---GASIIGLFIMMFYYSWQLSI 169

Query: 163 MALAPMPLMAVIIKRYGTQLHQRFKDAQAAFSSLNDHAQESLTSIRMIKAFGLEDHQSGS 222
           + +   P++++ I+    +     K+ Q     +   A++ L   + +  FG ++ ++  
Sbjct: 170 ILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKR 229

Query: 223 FAQVAADAGQKNMRVARVDARFDPTIYIAVAFSNLLAVGGGSWMVINGSMTLGSLTSFVM 282
           F +V+     + M++    +  DP I +  + +    +   S+  +  S+T G++T    
Sbjct: 230 FDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFS 289

Query: 283 YLGLMIWPMLALAWMFNIVERGSAAYSRIRQLLSEAPVVVDGSQPLPAESGTLAAEIAAF 342
            +  ++ P+ +L  +    +RG AA   +  +L       +G + +   +G L      F
Sbjct: 290 SMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTF 349

Query: 343 HYPGHSARVLNDVRFTLTPGKTLGLCGPTGSGKSTLLALLQRYFDVEQGRITYHQQPLHQ 402
            YPG     L ++   +  GKT+ L G +GSGKST+ +L+ R++D+++G I      L +
Sbjct: 350 TYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGHDLRE 409

Query: 403 IRLDELRSRFAVVGQTPFLFSDSVANNIALGRPDA-SQQQIEEAARLANVHDDILRLPQG 461
             L  LR++ A+V Q   LF+D+VANNIA  R +  S++QIEEAAR+A   D I ++  G
Sbjct: 410 YTLASLRNQVALVSQNVHLFNDTVANNIAYARTEEYSREQIEEAARMAYAMDFINKMDNG 469

Query: 462 YQTEVGERGVMLSGGQKQRIAIARALLLEAEVLVLDDALSAVDGRTEHQILSNLRQWGQK 521
             T +GE GV+LSGGQ+QRIAIARALL ++ +L+LD+A SA+D  +E  I + L +  + 
Sbjct: 470 LDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKN 529

Query: 522 RTLIISAHRLSALVDADEILVLQQGHVAQRGAHGQLSQQAGWYRDMYRYQ 571
           RT ++ AHRLS +  ADEI+V++ G + +RG H +L  Q G Y  +++ Q
Sbjct: 530 RTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 579