Pairwise Alignments

Query, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

Subject, 649 a.a., DNA topoisomerase III from Pseudomonas simiae WCS417

 Score =  593 bits (1529), Expect = e-174
 Identities = 304/619 (49%), Positives = 409/619 (66%), Gaps = 3/619 (0%)

Query: 1   MRLFLCEKPSQGRDIAAVLGASKRGQGFLSGPDTVVTWAVGHLLENAMPELYGEQYGKPW 60
           MRL+LCEKPSQ +DIAAVLGAS+RG G   G    VTW +GHLLE A P+ Y E+Y K W
Sbjct: 1   MRLYLCEKPSQAKDIAAVLGASRRGDGCWLGNGVTVTWCIGHLLETAPPDAYDEKY-KRW 59

Query: 61  RLDVLPLLPQKWQMVVKKDTADQFAVITRLLKQSDEVVIATDADREGEVIARELLEYCRF 120
            L  LP++P+KW+M VK  TA QF  + RLL ++ E+VIATDADREGE+IAREL+E+CR+
Sbjct: 60  VLADLPIVPEKWKMRVKPKTASQFKAVKRLLGEAQELVIATDADREGEMIARELVEHCRY 119

Query: 121 NGVVSRLWLSALDEASVRKALANIRPGNETENLYYAGLGRGRADWLIGMNISRLYTLKAR 180
            G + RLWLSALD+AS+RKALA ++PG ET +LY++ LGR RADWLIGMN+SRL+TL  R
Sbjct: 120 RGPIQRLWLSALDDASIRKALAALKPGAETFSLYHSALGRSRADWLIGMNMSRLFTLLGR 179

Query: 181 ELGYDGVLSVGRVQTPALALVVNRDRLIASFVPKPYFQVNVKLESGGVVFPAEWVAAAAY 240
           + GY GVL VGRVQTP L LVV+RDR IA FVP  Y+ ++V L+   + F A+W AA   
Sbjct: 180 QSGYQGVLPVGRVQTPTLRLVVDRDRSIADFVPVAYWAIDVDLQHERITFTAQWRAAEDA 239

Query: 241 TDGERRCVNQAVAEQVRKLCLTVGKAVILDVEKKREKIPAPLAFSLGVLQQVCAERFGYS 300
            D + RC++  +A            A ++ +  +R +  APL F LG LQ++C+++ G  
Sbjct: 240 CDDQGRCLDPQLARDAADAMRNAATARLVKLRTERMREVAPLPFDLGTLQEICSKKLGLG 299

Query: 301 PQQVLDTAQALYETHKATTYPRTDCGYLPESMLSEVPHVLSALQQSDPSLAPVIASIDPS 360
            Q+ LD AQ+LYETHK  TYPR+DCGYLP S  SE P +L+AL ++D ++  ++  I+  
Sbjct: 300 AQETLDIAQSLYETHKVITYPRSDCGYLPLSQHSEAPKILAALARADAAVNELMPHIETQ 359

Query: 361 FRSRIWDDKKITAHHAIIPTPHKCNLAGMNEAERNVYTLIRTHYLAQFMPLLEMDVTRAS 420
            RSR W+D K++AHH IIPT    ++  +    R VYTLIR  YLAQF+P  E D T+A 
Sbjct: 360 RRSRAWNDAKVSAHHGIIPTGAGKDVGQLTGKHRAVYTLIRARYLAQFLPNHEYDRTQAD 419

Query: 421 FNIGGQLFRTSGRVTVVPGWKTLFGQAAASDSDERDDEAAAVSLPPLTKDAVCGIRGAEL 480
           F+  GQ  R  G+V + PGWK    +A A       +  A  +LP L +     +    L
Sbjct: 420 FDCAGQALRAVGKVVIEPGWKRALPEALAPAKGR--EAPAPQALPALVQGQDYAVAKVNL 477

Query: 481 KALKTKPPQPYSFKTLIAAMMNAAGLVDDPALKKVLRDNAGLGTEATRAGILDVLMKRGF 540
           K L T+PP+P++   LI AM N A LV+DP LK+ L+D  G+GTEATRAGI+  L+ RG+
Sbjct: 478 KDLWTQPPKPFTEGDLIKAMKNVAKLVEDPLLKQKLKDTTGIGTEATRAGIIQGLLDRGY 537

Query: 541 LIKKGNHLHASDTACDLVDALPAALTQVGMTALWEQALDDIAAGKMTLDSFVDRQLRWVN 600
           L+K G  L A+  A  L+DA+P A+   G TA+WEQALD + +G+M+L+ FV +Q  W++
Sbjct: 538 LVKNGKALSATPAAFSLIDAVPRAIADPGTTAIWEQALDMVQSGEMSLEEFVAKQAAWMS 597

Query: 601 QLVEQGKQQAFTIRVPERP 619
           + V +      TI  P  P
Sbjct: 598 KQVARCNGMRMTITGPASP 616