Pairwise Alignments

Query, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

Subject, 876 a.a., DNA topoisomerase I, bacterial from Kangiella aquimarina DSM 16071

 Score =  127 bits (319), Expect = 2e-33
 Identities = 149/580 (25%), Positives = 232/580 (40%), Gaps = 74/580 (12%)

Query: 87  ITRLLKQSDEVVIATDADREGEVIA---RELLE--YCRFNGVVSRLWLSALDEASVRKAL 141
           + +L K +D + +ATD DREGE IA   RELL+    RF  VV     + + + ++++A 
Sbjct: 108 LKKLAKDADTIYLATDLDREGEAIAWHLRELLDGDESRFKRVV----FNEITKKAIQQAF 163

Query: 142 ANIRPGNETENLYYAGLGRGRADWLIGMNISRLYTLKARELGYDGVLSVGRVQTPALALV 201
           +  +PG    N   A   R   D ++G  +S L   K         LS GRVQ+ A+ L+
Sbjct: 164 S--KPGELDMNYVNAQQARRFLDRVVGFMVSPLLWRKISR-----GLSAGRVQSVAVRLL 216

Query: 202 VNRDRLIASFVPKPYFQVNVKL---ESGGVVFPAEWVAAAAYTDGERRCVNQAVAEQVRK 258
           V R+R I +F+P+ Y+ ++          +           +        N+A+      
Sbjct: 217 VEREREIRAFIPEEYWDIHANTLTQSKDDLRLQVNKYQGKNFRPNSEEETNKALE----- 271

Query: 259 LCLTVGKAVILDVEKKREKIPAPLAFSLGVLQQVCAERFGYSPQQVLDTAQALYETHKAT 318
             L      ++  E K +K  AP  F    LQQ  + R G+  ++ +  AQ LYE    T
Sbjct: 272 -VLKSSDYKVVTREDKPQKSKAPKPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGYIT 330

Query: 319 TYPRTDCGYLPESMLSEVPHVLSALQQSDPSLAPVIASIDPSFRSRIWDDKKITAHHAII 378
            Y RTD   L    +      +           P  A+   S+ S+   +    AH AI 
Sbjct: 331 -YMRTDSTNLSADAVESCRDYIKT--NIGGEYLPKEAN---SYSSK---EGAQEAHEAIR 381

Query: 379 PTP---HKCNLAGMNEAERNVYTLIRTHYLAQFMPLLEMDVTRASFNIGGQLFRTSGRVT 435
           P+       +L GM +    +Y LI   ++A  M   E DVT      G    +  GRV 
Sbjct: 382 PSDVAKKVGHLNGMEKDAERLYDLIWRQFVACQMLPAEFDVTSLKVQAGDYELKARGRVM 441

Query: 436 VVPGWKTLFGQAAASDSDERDDEAAAVSLPPLTKDAVCGIRGAELKALKTKPPQPYSFKT 495
              GW  +      +  DE         LP + +  +  ++  E K   TKPP  YS   
Sbjct: 442 RFDGWTKVLPMQKKNAEDE--------ELPNVKEGEMLELKKLEPKQHFTKPPARYSEAA 493

Query: 496 LIAAMMNAAGLVDDPALKKVLRDNAGLGTEATRAGILDVLMKRGFLIKKGNHLHASDTAC 555
           L+  +                 +  G+G  +T A I+  +  RG++  +    +A     
Sbjct: 494 LVKEL-----------------EKRGIGRPSTYASIISTIQDRGYVRLENRRFYAQKIGE 536

Query: 556 DLVDALPAA---LTQVGMTALWEQALDDIAAG----KMTLDSFVD---RQLRWVNQLVEQ 605
            + + L  +   L     TA  E+ LDDIA+G    K+TLD F D   +QL+  ++    
Sbjct: 537 IVTERLVESFNDLLDYSFTATMEKHLDDIASGRQNWKVTLDEFYDEFSKQLKKADEEEAD 596

Query: 606 GKQQAFTIRVPERPKCPLC-GGRTRLRKGPNGTFYGCENY 644
           G  +     V     C  C      +R    G F GC  Y
Sbjct: 597 GGMRR-NEAVETDILCEKCKTNHMAIRNASTGVFLGCMGY 635