Pairwise Alignments

Query, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

Subject, 867 a.a., type I DNA topoisomerase from Dickeya dianthicola ME23

 Score =  124 bits (311), Expect = 2e-32
 Identities = 146/569 (25%), Positives = 219/569 (38%), Gaps = 59/569 (10%)

Query: 90  LLKQSDEVVIATDADREGEVIARELLEYCRFNGV-VSRLWLSALDEASVRKALANIRPGN 148
           L + +D V +ATD DREGE IA  L E    +    SR+  + + + ++R+A  N  PG 
Sbjct: 101 LAQNADHVYLATDLDREGEAIAWHLREIIGGDDKRFSRVVFNEITKNAIRQAFEN--PGE 158

Query: 149 ETENLYYAGLGRGRADWLIGMNISRLYTLKARELGYDGVLSVGRVQTPALALVVNRDRLI 208
              N   A   R   D ++G  +S L   K         LS GRVQ+ A+ LVV R+R I
Sbjct: 159 LNINRVNAQQARRFMDRVVGYMVSPLLWKKIAR-----GLSAGRVQSVAVRLVVEREREI 213

Query: 209 ASFVPKPYFQVNVKLESGGVVFPAEWVAAAAYTDGERRCVNQAVAEQVRKLCLTVGKAVI 268
            +FVP+ Y++++  L +   +  A  +    +     R VNQA  +    L L   + V+
Sbjct: 214 KAFVPEEYWELHADLLANPEI--ALQMQVTHHNGKPFRPVNQAQTQAAVSL-LEKARYVV 270

Query: 269 LDVEKKREKIPAPLAFSLGVLQQVCAERFGYSPQQVLDTAQALYETHKATTYPRTDCGYL 328
            + E K         F    LQQ  + R G+  ++ +  AQ LYE     TY RTD   L
Sbjct: 271 AEREDKPTSSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYEAGH-ITYMRTDSTNL 329

Query: 329 PESMLSEVPHVLSALQQSDPSLAPVIASIDPSFRSRIWDDKKITAHHAIIPTPHKC---N 385
            +  L+     +    +      P   ++  S       +    AH AI P+  K     
Sbjct: 330 SQDALTMARDYIH--DEFGKRYLPEAPNLYTS------KENSQEAHEAIRPSDVKVQADQ 381

Query: 386 LAGMNEAERNVYTLIRTHYLAQFMPLLEMDVTRASFNIGGQLFRTSGRVTVVPGWKTLFG 445
           L  M    + +Y LI   ++A  M   + D T    + G    R  GR     GW  +  
Sbjct: 382 LKDMEADAQKLYQLIWRQFVACQMMPAQYDSTTLVVSAGDYQLRAKGRTLRFDGWTKVMP 441

Query: 446 QAAASDSDERDDEAAAVSLPPLTKDAVCGIRGAELKALKTKPPQPYSFKTLIAAMMNAAG 505
                D D         +LP +       +         TKPP  YS  +L+  +     
Sbjct: 442 ALRKGDEDR--------TLPAIDVGQSLSLEKLSPSQHFTKPPARYSEASLVKEL----- 488

Query: 506 LVDDPALKKVLRDNAGLGTEATRAGILDVLMKRGFLIKKGNHLHASDTACDLVDALP--- 562
                       +  G+G  +T A I+  +  RG++  +    +A      + D L    
Sbjct: 489 ------------EKRGIGRPSTYAAIISTIQDRGYVRVENRRFYAEKMGEIVTDRLEDNF 536

Query: 563 AALTQVGMTALWEQALDDIAAG----KMTLDSF---VDRQLRWVNQLVEQGKQQAFTIRV 615
             L     TA  E  LD +A      K  LD F     +QL         G  +   + V
Sbjct: 537 RELMNYDFTARMENRLDLVANSQAEWKGVLDEFFAEFSKQLETAELEPNDGGMKPNQM-V 595

Query: 616 PERPKCPLCGGRTRLRKGPNGTFYGCENY 644
                CP CG +  +R    G F GC  Y
Sbjct: 596 LTSIDCPTCGRKMGIRTASTGVFLGCSGY 624