Pairwise Alignments

Query, 674 a.a., DNA topoisomerase III from Dickeya dianthicola ME23

Subject, 773 a.a., DNA topoisomerase I, bacterial from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  112 bits (279), Expect = 8e-29
 Identities = 136/549 (24%), Positives = 231/549 (42%), Gaps = 78/549 (14%)

Query: 3   LFLCEKPSQGRDIAAVLGASKRGQGFLSGPDTVVTWAVGHLLENAMPELYGEQYGKPWRL 62
           L + E P++ + I          +G+L G D  VT + GH+ +  +P+  G++      +
Sbjct: 5   LVIVESPAKAKTI----------EGYL-GKDYKVTSSYGHVRD--LPK--GDK-----AI 44

Query: 63  DVLPLLPQKWQMVVKKDTADQFAVITRLLKQSDEVVIATDADREGEVIARELLEYCRF-N 121
           D+       ++  V  D  +    + +++K SD + +A+D DREGE I+  L E  +  N
Sbjct: 45  DIKNHFKPTYE--VTSDKKEVIKQLKKMVKDSDTIYLASDDDREGEAISWHLKEVLKLDN 102

Query: 122 GVVSRLWLSALDEASVRKALANIRPGNETENLYYAGLGRGRADWLIGMNISRLYTLKARE 181
               R+    + + ++ KA+ N  P +   +L  A   R   D L+G  +S +   K + 
Sbjct: 103 DKTKRIVFREITKNAITKAIEN--PRSIDIDLVNAQQARRILDRLVGFELSPVLWKKVK- 159

Query: 182 LGYDGVLSVGRVQTPALALVVNRDRLIASFVPKPYFQVNVKLESGGVVFPAEWVAAAAYT 241
                 LS GRVQ+ A+  +V R+R I  F  K  ++V       G    AE        
Sbjct: 160 ----AGLSAGRVQSVAVRFIVEREREIDKFESKSSYKVTAIFNVKGKELNAEL------- 208

Query: 242 DGERRCVNQAVAEQVRKLCLTVGKAVILDVEKKREKIPAPLAFSLGVLQQVCAERFGYSP 301
              ++   Q  AE   K CL    + I ++EKK  K      F+   LQQ  + +  +S 
Sbjct: 209 --PKKFETQEEAEAFLKNCLEADFS-IKNLEKKPAKKTPAAPFTTSTLQQEASRKLSFSV 265

Query: 302 QQVLDTAQALYETHKATTYPRTDCGYLPESMLSEVPHVLSALQQSDPSLAPVIASIDPSF 361
            Q +  AQ LYE  K  TY RTD   L +  +       SA  Q       +I++  P +
Sbjct: 266 AQTMTLAQRLYEAGK-ITYMRTDSVNLSQEAME------SAQNQ-------IISAFGPEY 311

Query: 362 -RSRIWDDKK---ITAHHAIIPTPHKCNLAGMNEAERNVYTLIRTHYLAQFM--PLLEMD 415
            +SR +  K      AH AI PT            E+ +Y LI    +A  M   LLE  
Sbjct: 312 HKSRKYTSKSEGAQEAHEAIRPTNFANEEISGERNEQRLYELIWKRAIASQMADALLEKT 371

Query: 416 VTRASFNIGGQLFRTSGRVTVVPGWKTLFGQAAASDSDERDDEAAAVSLPPLTKDAVCGI 475
           +     +        SG V    G+  ++ ++   + +E +++   + LPPLT      +
Sbjct: 372 LVTIGISNSDLTLSASGEVIKFEGFLKVYLESTDDEEEEENNDNKGL-LPPLTIGQDLDL 430

Query: 476 RGAELKALKTKPPQPYSFKTLIAAMMNAAGLVDDPALKKVLRDNAGLGTEATRAGILDVL 535
              + +   T+PP  Y+  +L+  +                 +  G+G  +T A  +  +
Sbjct: 431 IEMKSRQSFTRPPARYTEASLVKKL-----------------EEMGIGRPSTYAPTISTI 473

Query: 536 MKRGFLIKK 544
            KR ++IK+
Sbjct: 474 QKRNYVIKE 482