Pairwise Alignments

Query, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23

Subject, 1017 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score = 1001 bits (2587), Expect = 0.0
 Identities = 513/1001 (51%), Positives = 697/1001 (69%), Gaps = 1/1001 (0%)

Query: 6    KQQWNLSAWALAHQQLVAFFMLVIVAAGVMSYERLPRNEDPAFTIKTAVVSASWPGATVQ 65
            K  +NLS WAL HQ  V + M V +  G+ SY  L R EDP+FTIKT V+   WPGAT  
Sbjct: 2    KGSFNLSDWALKHQSFVWYLMFVSLLMGIFSYFNLGREEDPSFTIKTMVIQTRWPGATQD 61

Query: 66   DTVSFVTDVLEKKLQETPYLDFIESYSRPGEAVIFVNLRDSTPPSEVQGIWYAIRKKMKD 125
            +T+  VTD +EKKL+E   LD+ +SY+RPGE+ ++V LRD+T   ++  IWY +RKK++D
Sbjct: 62   ETLYQVTDRIEKKLEELDSLDYTKSYTRPGESTVYVYLRDTTKAKDIPDIWYQVRKKIQD 121

Query: 126  IAPSLPDGVGEPAVNDEFDDTFGTIYGFTADGYSPRELRDRVDDIRTELLATPDVGKIDV 185
            I    P G+  P  NDEF D FG+IY FTADG + R+LRD V+  R E+   P++GKI++
Sbjct: 122  IRGEFPAGIQGPGFNDEFGDVFGSIYAFTADGLTLRQLRDYVEQARAEVRDVPNIGKIEL 181

Query: 186  LGVQDEQIVAAFSPRQLAGMGLDLQQVTAALQAQNAVSPTGAIRTDNDKVALRVSGAFVS 245
            +G QDE +   FS R+LA +G+D +QV  ALQAQNAV+P G I    +++++R SG F S
Sbjct: 182  VGTQDEVLYLNFSTRKLAALGIDQRQVMQALQAQNAVTPAGMIEAGPERISVRTSGQFAS 241

Query: 246  EESLRQVTLHIGGRFIPLTDIATVYRQAAEPPAPAFRVNGQPAIGLAVSMAPTGNMLDFG 305
            E+ L+ V L I  RF  L DIA + R   +PP+P FR NGQ AIGLA+ M   GN+  FG
Sbjct: 242  EKDLQTVNLRINDRFFRLADIADIERGYVDPPSPMFRYNGQTAIGLAIGMKAGGNIQVFG 301

Query: 306  QALRSKMATIGASLPHGIEVINVADQSSVVKSSVNGFVKVLLEAVVIVLAVSFVSLGSRA 365
             AL+ +M  +   LP G+ V  V+DQ+ VVK +V GF   L EAVVIVLAVSFVSLG RA
Sbjct: 302  AALKKRMDQVVQDLPVGVGVHTVSDQAVVVKQAVGGFTSALFEAVVIVLAVSFVSLGVRA 361

Query: 366  GLVVAASIPMVLTMTFTGMEIAGIGLQRISLGALIIALGLLVDDAMITVEAMVSSLEKGE 425
            GLVVA SIP+VL M F  ME +GI +QRISLGALIIALGLLVDDAMITVE MV+ LE GE
Sbjct: 362  GLVVACSIPLVLAMVFVFMEYSGITMQRISLGALIIALGLLVDDAMITVEVMVTRLEMGE 421

Query: 426  AREQAATRAYDTTAFPMLTGTLVMVAGFIPVGFAASSAGEYCYSLFIVVLISLLSSWAVA 485
            ++EQAAT AY +TAFPMLTGTLV VAGF+P+G  ASSAGEY ++LF V+ ++L+ SW VA
Sbjct: 422  SKEQAATFAYTSTAFPMLTGTLVTVAGFVPIGLNASSAGEYTFTLFAVIAVALIVSWVVA 481

Query: 486  VLFSPLIGVWLLP-KAMNAHDHHAGRLSRAYDRLLSTALRYRGRTLLLSVALLALAVVAA 544
            V F+P++GV +L    + AH+   GR+ RA++  L   +R R  T++ +V L ALA+   
Sbjct: 482  VFFAPVLGVHILKGDKLKAHEAEPGRVGRAFEGGLLWCMRNRWLTIIGTVVLFALAIFCM 541

Query: 545  GRLEGEFFPASDRPELLVSLTLPRNASQQATEREVVRLEQSLKNDPDLDHFSTYVGSGAV 604
              ++ +FFP+SDRPE+LV L LP+NAS + T + V R E  +K+DPDL H+STY+G GA+
Sbjct: 542  RFVQNQFFPSSDRPEILVDLNLPQNASIEETRKVVDRFEARIKDDPDLVHWSTYIGQGAI 601

Query: 605  RFYLPMDVLLQNENIAQLVVVAKGLKERDALRARLEKRLQQDFSHLVTRVSPLELGPPVG 664
            RFYLP+D  LQN   AQLV+V+KG +ER A+  RL+K L ++F  + T V  LE+GPPVG
Sbjct: 602  RFYLPLDQQLQNPYYAQLVIVSKGFEERQAMMDRLQKILHEEFVGVGTNVQSLEMGPPVG 661

Query: 665  WPLKYRVTGPDIDKVREYAAGLATLIGGNPDAREVNLTAGEPERAIRIDLNQTEARAVGI 724
             P++YRV+G DID+VR++A  LATL+  N    E+     EP + +R+++ Q +AR +G+
Sbjct: 662  RPIQYRVSGADIDQVRKHAIELATLLDQNEHIGEMIYDWNEPGKVLRVEIAQDKARQLGL 721

Query: 725  SSQDVASALATIFSGSVVTSVRDRNRMVGVVVRARDEERQNLDTVASLQLRAANGQRVPL 784
            SS+DVA+ + +I SG  +T V D   +V VV RA D ER + DT+ +LQ+   NG  +PL
Sbjct: 722  SSEDVANVMNSIVSGVQITQVNDNIYLVDVVARAEDSERGSPDTLQNLQILTPNGTSIPL 781

Query: 785  GQIASVGYGVDEPIIWRRQRLPFITVQTDLAPGVRAQTLSTTLAPQVAAYQAALPAGYHI 844
               A+V Y +++P++WRR R P IT++  +   ++   L   L P++  + + LP G+ +
Sbjct: 782  LSFATVRYELEQPLVWRRDRKPTITIKASVNGEIQPTDLVAQLKPKIDEFASKLPVGFEV 841

Query: 845  EEGGSAAESNKGNNSVYQVLPVTLLVMLILLMVQLQRFSRMMLALLMAPFGLIGVVAAML 904
              GG+  ES K    + +V+P+ L +M   LM+QL    ++ L + +AP GLIGVV A++
Sbjct: 842  ATGGTVEESAKAQGPIRKVIPLMLFLMATFLMIQLHSVQKLFLVVSVAPLGLIGVVLALV 901

Query: 905  PTGTPMGFVALLGVIALAGMIIRNAVILISEVDTNTAAGMTTNEAIIHAARHRSRPILLT 964
            PTGTPMGFVA+LG++ALAG+IIRN+VIL++++D   A G++  +A++ A  HR RPILLT
Sbjct: 902  PTGTPMGFVAILGILALAGIIIRNSVILVTQIDEFEAQGLSPWDAVVEATNHRRRPILLT 961

Query: 965  ALAAILGMIPIATQVFWGPMAYAIIGGLIVATLLTLTVLPA 1005
            A AA LGMIPIA +VFWGPMAYA+IGG+IVATLLTL  LPA
Sbjct: 962  AAAASLGMIPIAREVFWGPMAYAMIGGIIVATLLTLLFLPA 1002