Pairwise Alignments

Query, 1021 a.a., efflux RND transporter permease subunit from Dickeya dianthicola ME23

Subject, 1021 a.a., RND efflux transporter from Pseudomonas putida KT2440

 Score =  838 bits (2166), Expect = 0.0
 Identities = 458/1008 (45%), Positives = 643/1008 (63%), Gaps = 11/1008 (1%)

Query: 9    WNLSAWALAHQQLVAFFMLVIVAAGVMSYERLPRNEDPAFTIKTAVVSASWPGATVQDTV 68
            +NLSAWAL ++Q+V F M+++ A G MSY +L ++EDP FT K  V+   WPGA+ ++  
Sbjct: 3    FNLSAWALRNRQIVLFLMILLAAIGAMSYTKLGQSEDPPFTFKAMVIRTLWPGASAEEVA 62

Query: 69   SFVTDVLEKKLQETPYLDFIESYSRPGEAVIFVNLRDSTPPSEVQGIWYAIRKKMKDIAP 128
              VT+ +EKKL ET   + I S+SRPGE+ +    RDS    ++  +WY IRKK+ DI  
Sbjct: 63   RQVTERIEKKLMETGEYERIVSFSRPGESQVTFMARDSLHSKDIPELWYQIRKKVADIRH 122

Query: 129  SLPDGVGEPAVNDEFDDTFGTIYGFTADGYSPRELRDRVDDIRTELLATPDVGKIDVLGV 188
            +LP  +  P  NDEF  TFG IY  T +G+    L+D  D I+ +L    DVGK+D++G+
Sbjct: 123  TLPPEIQGPFFNDEFGTTFGNIYALTGEGFDYAVLKDYADRIQIQLQRVKDVGKVDLIGL 182

Query: 189  QDEQIVAAFSPRQLAGMGLDLQQVTAALQAQNAVSPTGAIRTDNDKVALRVSGAFVSEES 248
            QDE++    S  +LA +G+ L+ V  ALQ QNAVS  G   T ++++ LRVSG F S E 
Sbjct: 183  QDEKVWIELSNLKLATLGVPLEAVQKALQEQNAVSTAGFFETPSERLQLRVSGRFDSVEQ 242

Query: 249  LRQVTLHIGGRFIPLTDIATVYRQAAEPPAPAFRVNGQPAIGLAVSMAPTGNMLDFGQAL 308
            +RQ  + +G R   + D+A V+R   +PPAP  R  G+ AIGLAVSM   G++L  G+AL
Sbjct: 243  IRQFPIRVGDRTFRIGDVAEVHRGFNDPPAPRMRFMGEDAIGLAVSMKDGGDILVLGKAL 302

Query: 309  RSKMATIGASLPHGIEVINVADQSSVVKSSVNGFVKVLLEAVVIVLAVSFVSLGSRAGLV 368
              +   +  +LP G+ +  V+DQ + VK+ V  FV+VL+EA+VIVL VSF SLG R GLV
Sbjct: 303  EGEFERLAHNLPAGMALRKVSDQPAAVKAGVGEFVQVLVEALVIVLLVSFFSLGLRTGLV 362

Query: 369  VAASIPMVLTMTFTGMEIAGIGLQRISLGALIIALGLLVDDAMITVEAMVSSLEKGEARE 428
            VA +IP+VL MTF  M   GIGL +ISLGAL++ALGLLVDDA+I VE M   +E+G  R 
Sbjct: 363  VALAIPLVLAMTFAAMHYFGIGLHKISLGALVLALGLLVDDAIIAVEMMAIKMEQGYDRL 422

Query: 429  QAATRAYDTTAFPMLTGTLVMVAGFIPVGFAASSAGEYCYSLFIVVLISLLSSWAVAVLF 488
            +AA+ A+ +TAFPMLTGTL+  AGF+P+  AASS GEY  S+F VV I+LL+SW  AV+F
Sbjct: 423  KAASYAWTSTAFPMLTGTLITAAGFLPIATAASSTGEYTRSIFQVVTIALLTSWVAAVVF 482

Query: 489  SPLIGVWLLPKAMNAHDHHAGRLSRAYD-----------RLLSTALRYRGRTLLLSVALL 537
             P +G  LLP     H    G+   A D           RL+   +R R   +LL++A  
Sbjct: 483  VPYLGERLLPDLAKLHAARHGKDGHAPDPYATPFYQRVRRLVEWCVRRRKTVILLTIAAF 542

Query: 538  ALAVVAAGRLEGEFFPASDRPELLVSLTLPRNASQQATEREVVRLEQSLKNDPDLDHFST 597
              +++    +  +FFPAS RPEL+V L L   AS   T   V +LE  LK    +D++  
Sbjct: 543  VGSILLFRFVPQQFFPASGRPELMVDLKLAEGASLANTAERVKQLEALLKQQDGIDNYVA 602

Query: 598  YVGSGAVRFYLPMDVLLQNENIAQLVVVAKGLKERDALRARLEKRLQQDFSHLVTRVSPL 657
            YVG+G+ RFYLP+D  L   + AQ VV+AK +++R+ LR+ L   + Q F  L  RV+ L
Sbjct: 603  YVGTGSPRFYLPLDQQLPAASFAQFVVLAKSMEDRERLRSWLISTVDQQFPDLRARVTRL 662

Query: 658  ELGPPVGWPLKYRVTGPDIDKVREYAAGLATLIGGNPDAREVNLTAGEPERAIRIDLNQT 717
            E GPPVG+P+++RVTG  I+K R  A  +A  +  NP    V+L   EP +A+ ++++Q 
Sbjct: 663  ENGPPVGYPVQFRVTGEHIEKARALAREVADKVRENPHVVNVHLDWEEPSKAVFLEIDQD 722

Query: 718  EARAVGISSQDVASALATIFSGSVVTSVRDRNRMVGVVVRARDEERQNLDTVASLQLRAA 777
             ARA+G+S+  +AS L +   G+ V+  R+ N ++ +++R   +ER  L  + SL L   
Sbjct: 723  RARALGVSTSHLASFLQSSLIGTTVSQYREDNELIEILLRGTLQERSELANLGSLALPTD 782

Query: 778  NGQRVPLGQIASVGYGVDEPIIWRRQRLPFITVQTDLAPGVRAQTLSTTLAPQVAAYQAA 837
            NGQ V L Q+A++ YG +E IIW R RLP +TV+ D+    +  TL   + P +   +A 
Sbjct: 783  NGQSVALSQVATLEYGFEEGIIWHRNRLPTVTVRADIYDQEQPATLVKQILPTLQEIRAK 842

Query: 838  LPAGYHIEEGGSAAESNKGNNSVYQVLPVTLLVMLILLMVQLQRFSRMMLALLMAPFGLI 897
            LP GY +E GG+  +S +G  SV   +P+ ++V+L LLM+QL+ FSR ++  L AP GLI
Sbjct: 843  LPDGYLLEVGGTVEDSERGQKSVNAGMPLFIVVVLSLLMIQLRSFSRTVMVFLTAPLGLI 902

Query: 898  GVVAAMLPTGTPMGFVALLGVIALAGMIIRNAVILISEVDTNTAAGMTTNEAIIHAARHR 957
            GV   +L    P GFVA+LG IALAGMI+RN+VIL+ +++ + AAGM   +AII A   R
Sbjct: 903  GVTLFLLVFRQPFGFVAMLGTIALAGMIMRNSVILVDQIEQDIAAGMERWQAIIEATVRR 962

Query: 958  SRPILLTALAAILGMIPIATQVFWGPMAYAIIGGLIVATLLTLTVLPA 1005
             RPI+LTALAA+L MIP++  VF+GPMA AI+GGLIVAT+LTL  LPA
Sbjct: 963  FRPIVLTALAAVLAMIPLSRSVFYGPMAVAIMGGLIVATVLTLLFLPA 1010