Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 356 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  201 bits (512), Expect = 2e-56
 Identities = 121/348 (34%), Positives = 197/348 (56%), Gaps = 2/348 (0%)

Query: 31  LLLAASLLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDG 90
           +L A+ LL  C+    +A   P+RPV ++ V       +    G I+   E+ LGFR+ G
Sbjct: 7   ILAASLLLVACSK--EDAPPEPVRPVLSMEVKAEDQENLGRFAGTIQARYESNLGFRVPG 64

Query: 91  RVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQLAP 150
           R+  R VDVGA V++G ++A LD  D +NQL+SA+ DLAR  A    A+ N +R ++L  
Sbjct: 65  RIARRVVDVGAEVEKGALLAVLDPTDQQNQLRSAQGDLARVQAQYINAQANARRQQELFN 124

Query: 151 NGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQV 210
            G  A++QLD AQ++  +  +  + A+ASVN   D+L Y  L    AG++TA +A  GQV
Sbjct: 125 RGVGAQAQLDIAQTDLKTTQATLDQAKASVNQANDQLRYAELRTDHAGIVTAWNAEAGQV 184

Query: 211 VNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLAD 270
           V+AGQ+VV LA    ++AV ++   L      D +  V+   +P++ T   VR++ P A 
Sbjct: 185 VSAGQQVVTLARPDIKEAVIDLPAGLAERLPPDVVFLVAGQLDPSVNTTAIVREIEPQAQ 244

Query: 271 AQTRTWRVRISLVEPPPEMVLGATVQGEVTLPGGNVINLPASALTRQGGRPAVFVVDPQT 330
           + TRT R R++L E PP   LG  +   ++      I +P SAL    G+  ++++D  +
Sbjct: 245 SATRTRRARLTLTETPPAFRLGTAISVTLSTAIAPRIEVPLSALQEVDGKTRIWLLDTHS 304

Query: 331 QTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKVTLAE 378
           QT++ + I++        ++ DG+  G+++  AGV+ L+ G+KV + E
Sbjct: 305 QTVQTRDISVISRDADSALLNDGVKPGERIVIAGVNSLKPGQKVKIDE 352