Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 366 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  157 bits (396), Expect = 6e-43
 Identities = 106/338 (31%), Positives = 172/338 (50%), Gaps = 4/338 (1%)

Query: 37  LLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDGRVVSRA 96
           LL+GC     EAA   +RP   V   PS +  + S  GE+R   E  L FR+ G+V  R 
Sbjct: 17  LLAGCGH--EEAAQTTIRPAMVVQPQPS-SQSMDSYPGEVRARYEPDLAFRIGGKVSKRL 73

Query: 97  VDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQLAPNGAIAR 156
           V+ G  VK  + +A LD +D   QL++ +A +A A A+  L      R K L     ++R
Sbjct: 74  VEEGERVKANQALAELDPQDVRLQLEATRAQVAGAEANLSLVRAERDRYKTLMDRQMVSR 133

Query: 157 SQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQVVNAGQE 216
           SQ D +++ + + V+  +  +A  +   ++ GY  L AP  GV+       GQVV+AGQ 
Sbjct: 134 SQYDNSENLYRAGVARLKQIKAEFDVASNQAGYAVLRAPQDGVVAKRVVEVGQVVSAGQT 193

Query: 217 VVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLADAQTRTW 276
           V  LAT   R+ + ++ E+          V+V L S P  +  G +R++SP AD ++RT+
Sbjct: 194 VFTLATDGEREVLISLPEQGFGRFKIGQPVSVELWSQPDQRFTGRIRELSPAADPKSRTF 253

Query: 277 RVRISLVEPPPEMVLGATVQGEVTLPGGNVINLPASALTRQGGRPAVFVVDPQTQTLRLQ 336
             R++         LG + +  + + G   +++P SAL+ + G   V+ V P   TL+  
Sbjct: 254 AARVAFTGGKVPAELGQSARVFIQVDGDIPLSVPLSALSAENGASYVWRVQPD-NTLKRT 312

Query: 337 PITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKV 374
           P+ +  + +  + V +GL+  D V  AGV  L  G++V
Sbjct: 313 PVRIGAFGEKTVPVLEGLSPTDWVIAAGVHVLHEGQQV 350