Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 362 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

 Score =  199 bits (505), Expect = 1e-55
 Identities = 124/344 (36%), Positives = 189/344 (54%), Gaps = 4/344 (1%)

Query: 37  LLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDGRVVSRA 96
           +L+GC+   +E     L  V    V P+     ++ TG+++   +T L FR+ G+++SR+
Sbjct: 17  MLTGCS---KEEVPETLPRVGVQQVQPTDFAARVTLTGDVQARVQTDLSFRVGGKIISRS 73

Query: 97  VDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQLAPNGAIAR 156
           VDVG  VK  +V+A LD +D +N + SAKA++  A A          R ++L P G  ++
Sbjct: 74  VDVGDHVKANQVLARLDPKDLQNNVDSAKAEVFAAQARVTQTSAAFVRQQKLLPKGYTSQ 133

Query: 157 SQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQVVNAGQE 216
           S+ D A++   S  S  ++AQA + +  ++L YT L +  AGVIT   A  GQVV A   
Sbjct: 134 SEYDAAEAALRSNQSALKAAQAQLANANEQLSYTALVSEAAGVITERQAEVGQVVQATMP 193

Query: 217 VVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLADAQTRTW 276
           +  LA    RDAVFNV E L+ +  +D  V VSLL +P ++  G VR+++P   AQ+ T 
Sbjct: 194 IFSLAVDGDRDAVFNVYESLLVAPPSDAGVVVSLLDDPKVQAHGFVREITPTVSAQSGTV 253

Query: 277 RVRISLVEPPPEMVLGATVQGEVTLPGGNVINLPASALTRQGGRPAVFVVDPQTQTLRLQ 336
           +V++ L + PP M LGA V       G   I LP SALT+    PAV+VV  +   + L+
Sbjct: 254 QVKVGLKDVPPGMQLGAPVTATTNAQGRPSIELPWSALTKALHEPAVWVVG-EGDKVELR 312

Query: 337 PITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKVTLAEAQ 380
            + +R Y   ++VVA GL  G+ V   G   L  G +V   +A+
Sbjct: 313 KVEIRRYLTGKIVVASGLKGGETVVVNGGQLLHPGMQVLKVDAK 356