Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 355 a.a., Efflux membrane fusion protein, RND family from Pseudomonas putida KT2440

 Score =  211 bits (536), Expect = 3e-59
 Identities = 130/348 (37%), Positives = 195/348 (56%), Gaps = 2/348 (0%)

Query: 31  LLLAASLLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDG 90
           +L AA LL GC     E A   +RPV +V V P V  ++    G I+   E+ LGFR+ G
Sbjct: 7   MLSAAVLLVGCTS--EEEAPEVIRPVLSVKVEPQVQSQLGRFAGSIQARFESTLGFRVSG 64

Query: 91  RVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQLAP 150
           R+  R +DVGA VK G+ +ATLD  D +NQL++A+ DLA+  A    A+ + +R +QL  
Sbjct: 65  RIARRWLDVGAQVKPGDTLATLDPTDQQNQLRAAEGDLAKVQAQWINAQADARRQQQLYD 124

Query: 151 NGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQV 210
            G  A++QLD AQ+N  +  +  E A+++V+  +D+L Y+ L A  A VITA  A  GQ 
Sbjct: 125 RGVGAQAQLDIAQTNLKTTSAALEQARSAVSQARDQLDYSTLRADHAAVITAWQAEAGQT 184

Query: 211 VNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLAD 270
           V AGQ VV LA    ++AV ++   L          TV+   +P I T   +R++ P AD
Sbjct: 185 VTAGQAVVTLARPDVKEAVIDLPIGLAEQLSKGLTFTVASQLDPTINTTASLRELEPQAD 244

Query: 271 AQTRTWRVRISLVEPPPEMVLGATVQGEVTLPGGNVINLPASALTRQGGRPAVFVVDPQT 330
           A TRT R R++L   P    LG  +   ++        LP SAL  + G+  V+V+D Q 
Sbjct: 245 ATTRTRRARLTLASTPAAFHLGTAISVTLSSEVSPRSELPLSALLERDGKTQVWVIDTQN 304

Query: 331 QTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKVTLAE 378
           +T+  + + L   +   +V++ G+  G++V TAGV+ L+ G+KVT  E
Sbjct: 305 KTVATRDVALIDRTADSIVLSAGVQPGERVVTAGVNSLKPGQKVTFDE 352