Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 367 a.a., RND efflux membrane fusion protein from Pseudomonas putida KT2440

 Score =  134 bits (337), Expect = 4e-36
 Identities = 103/349 (29%), Positives = 162/349 (46%), Gaps = 6/349 (1%)

Query: 28  LGTLLLAASLLSGCNDAGREAAAAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFR 87
           +G LL  A +  G +  G++    P  PV         +    S +G +    ++ LGFR
Sbjct: 9   VGCLLPLALVACGDSSPGKDPRDTP--PVVKAVSVQDASALARSFSGVVVARTQSDLGFR 66

Query: 88  LDGRVVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQ 147
           + G+++ R VD G  VK+G+ +  +D  D   Q ++ +  +  A A  +    +  R + 
Sbjct: 67  VSGKILQRLVDTGQTVKRGQPLMRMDPVDLNLQARAQQEAVTAARARAKQTGDDEARYRG 126

Query: 148 LAPNGAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANP 207
           L  +GA++ S  D+ ++   +A +   +AQA  +  ++   Y  L A   GV+    A P
Sbjct: 127 LVADGAVSASSYDQIKAAADAAKAQLSAAQAQADVARNATEYAVLLADADGVVMDTLAEP 186

Query: 208 GQVVNAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSP 267
           GQVV+AGQ VVRLA    R+AV  + E L  +  +  L T  L   PA      +R +S 
Sbjct: 187 GQVVSAGQAVVRLARAGQREAVVYLPETLRPAPGSTALAT--LFGKPAQAVPAKLRLLSD 244

Query: 268 LADAQTRTWRVRISLVEPPPEMVLGATVQGEV--TLPGGNVINLPASALTRQGGRPAVFV 325
            AD  TRT+  R  L  P     LGAT+  E+  T        +P  AL   G    V+V
Sbjct: 245 AADPITRTFEARYVLTGPLASAPLGATITLEIPDTDTDFEAKQIPIGALFDPGNGAGVWV 304

Query: 326 VDPQTQTLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKV 374
           +  Q   +  + + +   SD + VV   L AGD++   G   LR G +V
Sbjct: 305 IAGQPAKVSWRAVEVLSVSDEKAVVKSDLHAGDRIVALGAHLLRDGVEV 353