Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 366 a.a., RND membrane fusion protein from Pseudomonas putida KT2440

 Score =  152 bits (383), Expect = 2e-41
 Identities = 114/343 (33%), Positives = 174/343 (50%), Gaps = 8/343 (2%)

Query: 34  AASLLSGCNDAGREAA--AAPLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDGR 91
           AA LL+ C   G+EAA  AAP RP   V   P+ A    S  GE+R   E  L FR+ G+
Sbjct: 14  AALLLAAC---GQEAAPPAAP-RPALVVQPQPAEAAAD-SYPGEVRARFEPELAFRIGGK 68

Query: 92  VVSRAVDVGAVVKQGEVIATLDARDSENQLQSAKADLARAAASERLAEQNLKRMKQLAPN 151
           V  R V+ G  VK  + +A LD +D   QL++ +A LA A A+  L      R ++L   
Sbjct: 69  VSKRLVEEGQRVKADQPLAELDPQDVRLQLEANRAQLAAAEANLALVRAERDRYQKLLER 128

Query: 152 GAIARSQLDEAQSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQVV 211
             ++ SQ D A++ + + ++  + A+A  +   ++  Y  L AP AGVI       GQVV
Sbjct: 129 QMVSHSQYDNAENLYRAGLARLKQAKAEFDVAGNQAEYAVLRAPQAGVIAKRQVEVGQVV 188

Query: 212 NAGQEVVRLATFAGRDAVFNVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLADA 271
            AGQ V  LA    R+    + E+  A       V+V L S+P  + QG +R++SP AD 
Sbjct: 189 AAGQTVFTLAADGEREVAIGLPEQQFARFAVGQPVSVELWSHPQARFQGRIRELSPAADP 248

Query: 272 QTRTWRVRISLVEPPPEMVLGATVQGEVTLPGGNVINLPASALTRQGGRPAVFVVDPQTQ 331
           ++RT+  RI+         LG + +  +   G   + +P SA+T + G+  V+ V+ +++
Sbjct: 249 RSRTFAARIAFTTAAVPAELGQSARVFIAKDGLIPLAVPLSAVTAENGQAYVWRVNKESR 308

Query: 332 TLRLQPITLRHYSDSQMVVADGLAAGDKVATAGVSKLRAGEKV 374
            L    + L  Y    + V +GL  GD V  AG   LR G++V
Sbjct: 309 -LERATVRLGAYGSDSVPVLEGLDPGDWVVAAGGHVLREGQEV 350