Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 371 a.a., putative membrane protein (VIMSS) from Escherichia coli BW25113

 Score =  105 bits (261), Expect = 3e-27
 Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 20/330 (6%)

Query: 51  APLRPVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDGRVVSRAVDVGAVVKQGEVIA 110
           AP+   +T+ V P    + +  TG++    +  +G ++ G++ + +V +G  VK+ +++ 
Sbjct: 31  APVPTYQTLIVRPGDLQQSVLATGKLDALRKVDVGAQVSGQLKTLSVAIGDKVKKDQLLG 90

Query: 111 TLDARDSENQLQSAKADLARAAASERLAEQNLK-------RMKQLAPNGAIARSQLDEA- 162
            +D   +ENQ++  +A L    A  + AE  LK       R ++LA   A+++  LD A 
Sbjct: 91  VIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTKAVSQQDLDTAA 150

Query: 163 ------QSNWSSAVSVRESAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQVVNAGQE 216
                 Q+   +  +  +  QAS+++ +  L YTR+ AP+AG +T ++   GQ V A Q+
Sbjct: 151 TEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQ 210

Query: 217 VVRLATFAGRDAVF---NVSERLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLADAQT 273
              + T A   A+     VSE  +           ++L +P  + +G ++DV P  +   
Sbjct: 211 APNILTLADMSAMLVKAQVSEADVIHLKPGQKAWFTVLGDPLTRYEGQIKDVLPTPEKVN 270

Query: 274 RT--WRVRISLVEPPPEMVLGATVQGEVTLPG-GNVINLPASALTRQGGRPAVFVVDPQT 330
               +  R  +  P   + L  T Q  + L    NV+ +P SAL    G     V   + 
Sbjct: 271 DAIFYYARFEVPNPNGLLRLDMTAQVHIQLTDVKNVLTIPLSALGDPVGDNRYKVKLLRN 330

Query: 331 QTLRLQPITLRHYSDSQMVVADGLAAGDKV 360
              R + +T+   +D+ + +  GL AGD+V
Sbjct: 331 GETREREVTIGARNDTDVEIVKGLEAGDEV 360