Pairwise Alignments

Query, 380 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

Subject, 348 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  104 bits (260), Expect = 3e-27
 Identities = 92/321 (28%), Positives = 139/321 (43%), Gaps = 17/321 (5%)

Query: 55  PVRTVTVAPSVAGEVLSQTGEIRPTEETALGFRLDGRVVSRAVDVGAVVKQGEVIATLDA 114
           PVRT T+  +      +  G   P++E  L     G+V+      G  V++G+VIA LD 
Sbjct: 43  PVRTETIKKTAHKISFTSNGTFEPSQELTLKAEASGKVLKIYKKKGDYVRKGDVIAKLDD 102

Query: 115 RDSENQLQSAKADLARAAASERLAEQNLKRMKQLAPNGAIARSQLDEAQSNWSSAVSVRE 174
              +++L  ++  L       R  E++L R + LA   AI   QL+E ++    A S   
Sbjct: 103 ELIQSELSISEVKL-------RQNEKDLGRYENLAGTEAITEKQLEEIRNATKMAAS--- 152

Query: 175 SAQASVNSEQDRLGYTRLSAPIAGVITAVSANPGQVVNAGQEVVRLATFAGRDAVFNVSE 234
                V   + RL  T ++API+G I       G +++ G  VV +        V NVSE
Sbjct: 153 ----QVKMNKKRLANTAITAPISGYINEDYIEIGTLMSPGMNVVDIVNVKPLKLVVNVSE 208

Query: 235 RLIASGLNDPLVTVSLLSNPAIKTQGHVRDVSPLADAQTRTWRVRISLVEPPPEMVLGAT 294
             IA       V V +   P     G V   S   DA  R + V I+L E   ++  G  
Sbjct: 209 LEIARISVGDSVAVKVGVLPEKDFTGKVSFTSNKGDASLR-YEVEIALQEETAQIKPGMF 267

Query: 295 VQGEVTLPGGNVINLPASALTRQGGRPAVFVVDPQTQTLRLQPITLRHYSDSQMVVADGL 354
                  P    I +   AL      P VFVV+     L+   + L    D+++V+ DGL
Sbjct: 268 AYASFEYPAEEAILIDRKALANGVKNPEVFVVENGKAVLK--KVKLAQVGDNKLVLLDGL 325

Query: 355 AAGDKVATAGVSKLRAGEKVT 375
             GDK+ T+G+  L+ G  V+
Sbjct: 326 KEGDKLVTSGLINLKDGTAVS 346