Pairwise Alignments

Query, 389 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

Subject, 478 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  106 bits (264), Expect = 2e-27
 Identities = 98/344 (28%), Positives = 160/344 (46%), Gaps = 25/344 (7%)

Query: 59  QSNPDLNRTRYYEILDAWYGPKSFDLSIASEDWLILGVL--VLVAIPLIVML---GLW-- 111
           Q N  L+ TR   +    Y      L  + ++ L+   L   ++A+P++++L   G W  
Sbjct: 126 QGNRILSATRLMPLQGGEYVRVLLSLDRSDDEALLSAYLRSTVIALPMLLILIGMGAWWL 185

Query: 112 ---AARPLSVQFSQLAMSARAVARGQFATRARMVPGAPAELTLLTRDFNAMTAQLERYER 168
                 PL  QFS++A    A    Q  T    +   P EL  L +  N M  +L+   +
Sbjct: 186 VQRGLAPLQ-QFSRVA----AKVSTQDLTHRLSLDNLPKELGELAQGINFMLHRLDAGVQ 240

Query: 169 ELHASHVAMAHELRSPLTAAMGRLQGMLDGVFSPDDRQ--LQMVMNQMQNLNRLIEDLHV 226
           +L      +AHELR+PLT  MG+ Q  L      D+ +  L+    +M+ L+R++ D+  
Sbjct: 241 QLTQFSDDLAHELRAPLTNLMGKAQVTLSRERPSDEYKASLESCTEEMERLSRMVSDMLF 300

Query: 227 LSMVSAGQLAIDKTRLNPVALLRDRIAWLKPHADAA---GFTITLHGDEEGYCLADPLRL 283
           L+ VS       +    PV+L ++    ++  A +A     ++TL GD   +   D L +
Sbjct: 301 LAQVSHPAA---RAGFAPVSLEQEAQRVMELFALSAEDKNVSLTLRGD--AWVTGDRLMI 355

Query: 284 GQVFTILMDNALRYAAEGKAQHIEVARRQHRWLIRFRDYGPGVSAAFLPSIFERFSRADT 343
            +  + L+ NA+R+     +  + V   +    +   + G G+ A  LP +FERF RAD 
Sbjct: 356 QRAISNLLSNAIRHTPRDASVLLLVESYEQSVSLSVGNPGRGIEAHHLPHLFERFYRADN 415

Query: 344 SRARHSGGSGLGLSIAQAICEALGGSLTAENHPEGGMCFTLELP 387
           SRAR  GG+GLGL+I Q+I     G     + P     F+L  P
Sbjct: 416 SRARAEGGTGLGLAIVQSIMHLHQGHADVSSQPGRFTRFSLVFP 459