Pairwise Alignments

Query, 389 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

Subject, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

 Score =  100 bits (249), Expect = 2e-25
 Identities = 65/217 (29%), Positives = 107/217 (49%), Gaps = 7/217 (3%)

Query: 177 MAHELRSPLTAAMGRLQGMLDGVFSPDDRQ-LQMVMNQMQNLNRLIEDLHVLSMVSAGQL 235
           M+HE+R+PL   +G    +     +P     L  +     NL  +I ++   S + AG+L
Sbjct: 293 MSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKL 352

Query: 236 AIDKTRLNPVALLRDRIAWLKP--HADAAGFTITLHGDEEGYCLADPLRLGQVFTILMDN 293
            +D    N   L++D +  L P  HA        ++ D     + DPLRL Q+ T L+ N
Sbjct: 353 VLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSN 412

Query: 294 ALRYAAEGKAQHIEVARRQHRWLIRFR----DYGPGVSAAFLPSIFERFSRADTSRARHS 349
           A+++  EG      +   +H    + R    D G G+S   + ++F+ FS+AD S AR  
Sbjct: 413 AIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQP 472

Query: 350 GGSGLGLSIAQAICEALGGSLTAENHPEGGMCFTLEL 386
           GG+GLGL I++ + E +GG +  ++ P  G  F + L
Sbjct: 473 GGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISL 509