Pairwise Alignments

Query, 591 a.a., hypothetical protein from Dickeya dianthicola ME23

Subject, 576 a.a., terminase family protein from Erwinia tracheiphila SCR3

 Score =  328 bits (842), Expect = 3e-94
 Identities = 213/583 (36%), Positives = 312/583 (53%), Gaps = 41/583 (7%)

Query: 12  ARLLYLKRATPKEIAADLNLPNARIIYYWAQKFGWADLLSAESTEEAIERRYQLLAGRDK 71
           A+ LY +   P EIA  + + N   IY W ++  W +    +   ++++ R   L  +  
Sbjct: 11  AKQLYWQGYPPAEIARLMGI-NQNTIYAWKKRDEWDETPPVQRVSQSMDARLIQLTDKKD 69

Query: 72  KTELELQEMDMLIAHAVKLRAQSNKHKEKLAAAGHGNTPGSRSNDDDERPAKKRQYRKND 131
           KT  + +E+D+L     KL         +LA AG G  P  R          K  + +  
Sbjct: 70  KTGGDFKEIDLLTRQLKKLS------DGQLAGAGTGKKPRQRK--------LKNHFTEEQ 115

Query: 132 ISSLTKEDFDAWADEHLFGYQKHLRLNIGQQVRNILKSRQIGATWYFAFEAFENAVLTG- 190
           I +L +E   A   +H   +Q+       Q+ R +LK+RQ GATWYFA EA   A+    
Sbjct: 116 IVAL-REKITASLAQHQRKWQEQQ----DQRNRMLLKTRQCGATWYFAREALLRALRDDV 170

Query: 191 -----EPQIFLSASRAQAEVFRSYIVNIAQQYFDITLTG-NPIRLSNGAELRFLSTNKNT 244
                  QIFLSASR QA  FR +I  +A +  D+ L G + I LSNGAEL FL T+  T
Sbjct: 171 EYSYQRNQIFLSASRRQAHQFRGFIQKVAGEV-DVELKGGDKIVLSNGAELHFLGTSAAT 229

Query: 245 AQSYSGHLYCDEYFWVPNFARLNEVASAMATHDKWRTTYFSTPSAKTHQAYPFWTGEEWK 304
           AQSY+G+LY DE+FWV +F +L +VA AMAT      TYFSTPS++TH+AYPFWTG+ W 
Sbjct: 230 AQSYTGNLYFDEFFWVSHFTKLRKVAGAMATMKGLTRTYFSTPSSETHEAYPFWTGDRW- 288

Query: 305 RGNKKRAGVNFPGFD---ELRDGGRLCPDGQWRYVITMEDAIRGGFNLASLEKLRNRYNV 361
             N+KR  V    FD   +  + G LCPD  WR ++T++D I  G+   +LE++++  + 
Sbjct: 289 --NEKRPKVQRKAFDVGWKTLNSGLLCPDKTWRQIVTLKDIIDQGWEYTNLEEIQDENSE 346

Query: 362 DTFNMLYMCVFVDNKDAVFSFDDLERCGVDP-ATWQDHDPTASRPFGNREVWGGYD---P 417
           D F  LYMC FV + ++ F+ + L  CG D    W D  P ASRP GNR VW GYD    
Sbjct: 347 DEFRNLYMCEFVRDGESAFNLNALIGCGADGYDEWPDWKPFASRPMGNRPVWIGYDANGS 406

Query: 418 ARSGDLSTFVIVAPPIYEGEKFRVLLVVNWHGMNFRYQANQIKKLFQRYHFTYIGIDVT- 476
           + +GD     +V PP+  G +FR +      G  F  QA  I+    +Y+  ++GIDVT 
Sbjct: 407 SGNGDSGAICVVVPPLVPGGRFRTVETEQVRGFEFEEQAKVIENFTFKYNVQHVGIDVTG 466

Query: 477 GIGAGVFENIQHFAMRQATAIRYGVETKNRLVMKAADVVESQRIEWDQDEKAIPASFMAI 536
           G G  V++ ++ F    A      + +K  LV+K   ++ + R E+D+ E+A+  +F ++
Sbjct: 467 GNGEAVYQIVKKF-FPMAMPWTMSMTSKRTLVLKMLQLIRAGRWEYDRSERALINAFNSV 525

Query: 537 RRTTTASGNAMTFIADRSAETGHAEAFFAIAHALDNEPLNYEN 579
           R+  T  G  +T+  DRS    H +  +A   A+ NEPL  E+
Sbjct: 526 RKVKT-PGGFITYDTDRSRGVSHGDLAWANMLAIINEPLGQES 567