Pairwise Alignments

Query, 295 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

Subject, 292 a.a., ABC transporter membrane spanning protein (sugar) from Agrobacterium fabrum C58

 Score =  127 bits (318), Expect = 4e-34
 Identities = 86/296 (29%), Positives = 145/296 (48%), Gaps = 15/296 (5%)

Query: 8   AVTCSTRAPLPAWLRWRQSRRATLSLLM-----ICAALLWISPFIWMLSSAFSATTFGVG 62
           A+T +T  P     + R+ RR  L +++     I   LL+++P + +L ++F      + 
Sbjct: 4   ALTSATTQP-----KKRRGRRIGLYVILFHITCILVGLLFLAPIVLVLLASFRPPA--MA 56

Query: 63  MASLLPRWPLTLSNFRDAWQSADWISLYA-NTIFFTFGTFFVQLLTITTAGYVFACHEFR 121
            + L     L   N+         I  YA N++F    T    +L    AGY F+   F 
Sbjct: 57  SSGLFSVQGLGFGNYGRLEDFGAGILHYAGNSLFVALATAAFTILVSVFAGYGFSRFRFP 116

Query: 122 GKQTLFLLFLVQLMIMPVVMMVPNMMTLKAFGLLNTLTGVMMPYFTSA--FGVFLMRQAF 179
            K   F+L L  +M+    ++ P  + L   GL NTL+G++  Y T    F +F+MR AF
Sbjct: 117 FKLVAFVLILSTIMVPFQSILTPLFLILPKLGLQNTLSGLVFIYVTLQLPFSIFMMRNAF 176

Query: 180 LAIPKEIEEAALMEGCRWWQVLFRVLLPMSWPSILAFATVSITYHWNEYLWPLMMLNDPD 239
            A+PKEIEEAA ++G +  + L  VL P+ +P I++    +    WNE+L  L++L D D
Sbjct: 177 DAVPKEIEEAARIDGVKGLRALVYVLGPLVFPGIVSVGLFAFLNAWNEFLGALVLLTDQD 236

Query: 240 KQVLTVGLVSFAMGAESGGQWGMISAGTLMVCLPLMLAFIVFQKQFLRSFGFSGIK 295
           +  L V + +   G      WG + AG  ++ +P ++ F+  Q+ ++R      +K
Sbjct: 237 RYTLPVLVTAVRSGRYGSIDWGAVQAGVTVMMIPCLILFVTLQRFYIRGLTAGAVK 292