Pairwise Alignments

Query, 295 a.a., carbohydrate ABC transporter permease from Dickeya dianthicola ME23

Subject, 291 a.a., sugar ABC transporter permease from Agrobacterium fabrum C58

 Score =  123 bits (309), Expect = 4e-33
 Identities = 81/297 (27%), Positives = 146/297 (49%), Gaps = 17/297 (5%)

Query: 9   VTCSTRAPLPAWLRWRQSRRAT-LSLLMICAALLWISPFIWMLSSAFSATTFGVGMASLL 67
           +T +  AP P     R   ++  L   +I A+   + P +WM+S +F       G +SL+
Sbjct: 1   MTDAVTAPRPGQGPQRSPLKSVMLHTALIIASFAMLYPILWMISGSFRPQDELFGSSSLI 60

Query: 68  PRWPLTLSNFRDAWQSADWISLYANTIFFTFGTFFVQLLTI-------TTAGYVFACHEF 120
           P      S          W  L  +   F + +FF+ +L         +   + FA   F
Sbjct: 61  P------SAVDVGGYIRGWTGLQVSFGQFFWNSFFISVLATIGNVVGCSLTAFAFARLRF 114

Query: 121 RGKQTLFLLFLVQLMIMPVVMMVPNMMTLKAFGLLNTLTGVMMPYF--TSAFGVFLMRQA 178
            G+   F L L  LM+   V+++P  +     G +NT   +++P +  T AF +FLM Q 
Sbjct: 115 GGRNFWFALMLGTLMLPYHVVLIPQYILFLEMGWVNTSLPLIVPKYLATDAFFIFLMVQF 174

Query: 179 FLAIPKEIEEAALMEGCRWWQVLFRVLLPMSWPSILAFATVSITYHWNEYLWPLMMLNDP 238
           F  IP+E++EAA+M+GC  +++ ++++LP+S P +   A  S  + W+++  PL+ LND 
Sbjct: 175 FRGIPRELDEAAVMDGCSPFRIYWKIMLPLSMPVLATAAIFSFIWTWDDFFGPLIYLNDI 234

Query: 239 DKQVLTVGLVSFAMGAESGGQWGMISAGTLMVCLPLMLAFIVFQKQFLRSFGFSGIK 295
           +   + +GL SF + +     W  + A + +  +P+ L F+ FQ+  +     +G+K
Sbjct: 235 NTYTVQLGLRSF-VDSTGSSDWTSLFAMSNLSLVPVFLFFLFFQRLLIEGIATTGMK 290